Phaethon lepturus (White-tailed tropicbird): 104624912
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Entry
104624912 CDS
T08325
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-R-like
KO
K06252
tenascin
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04510
Focal adhesion
plet04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104624912
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104624912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
plet00536
]
104624912
Glycosaminoglycan binding proteins [BR:
plet00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104624912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
DUF4998
DUF2534
Motif
Other DBs
NCBI-GeneID:
104624912
NCBI-ProteinID:
XP_010290698
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
PGARYRLAVSALRGANESRPALAQFTTGRRDSTWDLTDTMPGLELAWDNSEAEVHSYRVV
YSTLAGEHYHEVLVPRDTGPTTRATLADLVPGTEYGIGISAVMDSQQSVPATMNARTELD
SPRDLLVTASTETSISLTWTKATGPIDHYRVTFTPASGMASEVTVPKDESQLTLSELEPG
TEYTISIIAERGRQQSLEATVDAFTGVRPITQLHFSQLTSSSVNVTWSDPSPPADRLVLT
YSPRDEEEALQLTLDGTRRHTSLTGLQPSTEYLVSLVAVHGAVSSEPVVGSITTGIDAPK
GLRVGNVTQESMIVYWSPPIAAFDSYRMSYRAAEGKTDSTTIASDATEYTLHHLQPATQY
EIGMKSVRGREESEVASITVYTAMDAPLGVTATNVTPTEALLQWNPPLSEVESYVLILTR
RAVAGETILVDGVNQEYQLTNLLPTTTYTVSMYATNGPLTSQTISTNFTTLLDPPTNLTA
SEVTRRSALLSWVPPVGEIENYVMTYRSTDGSRKELIVDAEDTWIRLEGLSETTEYTVRL
QAAQNAMRSGFISTTFTTGGRVFANPQDCAQHLMNGDTLSGVYTISINGDLSQRVQVYCD
MTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGNLEDEFWLGLDNIHKITSQGRYELRID
MRDGQEAAYAYYDKFSVGDSRSLYKLRIGDYNGTSGDSLTYHQGRPFSTKDRDNDVAVTN
CAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRNIS
GRKRRSLQL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
cccggcgcccgctaccgcctcgccgtcagcgccctccggggtgccaacgagagccggccg
gccctcgcccagttcaccacaggaaggagggacagcacgtgggacctcacggacaccatg
cccggcctcgagctcgcctgggacaacagcgaggccgaggtgcacagctacagggtggtc
tacagcaccctggctggggagcactaccacgaagtcctggtgccgcgggacaccggtccc
accacccgggccaccctcgcagatctggtgccggggacagagtacggcatcgggatttca
gccgtgatggacagccagcagagcgtgccagcaaccatgaatgccaggaccgagcttgac
agcccccgggacctcctggtgacggcttccacagagacgtccatctcgctaacctggacc
aaagccacaggtcccattgaccactaccgcgtcaccttcacccccgcctcggggatggcc
tccgaagtgacagtgcccaaggacgagtcgcagctcactctctctgagctggagcctggg
acggagtacaccatctccatcattgccgaaaggggacgccagcagagcctggaggccaca
gtggatgccttcacaggggtccggcccatcacgcagctccacttctcccagctgacatcc
tctagcgtgaacgtcacgtggagtgatccatccccaccagcagaccgcctcgtcctcacc
tacagcccccgggacgaggaggaggcactgcagctcacgcttgacggcacccgcaggcac
accagcctgacgggcttgcagccatccaccgagtacttggtatcgctggtggctgtgcac
ggcgccgtcagctccgagcctgtcgtgggctccatcacgacagggattgatgcgccaaag
ggcctcagggtgggcaatgtcacccaggagtccatgatcgtctactggagccctcccatc
gctgccttcgacagctatagaatgtcctaccgtgccgccgaagggaagacagacagcacc
accatcgccagcgatgccaccgagtacaccctccaccacctgcagcccgccacccagtac
gagattgggatgaagagcgtgcggggccgggaggagagcgaggtggcctccatcactgtg
tatacagccatggatgcccccttgggggtcacagccaccaacgtcacccccacggaggcg
ctgctgcagtggaacccgccgctctcagaggtggagagctacgtcctcatcctcacccgc
cgtgcagttgcaggagaaacaattcttgtggatggagtcaaccaggagtaccagctgacc
aacctcctgcccactaccacttacacagtctctatgtatgccaccaatgggcctctcacc
agccagaccatcagcaccaactttacaactcttttggatcctccaacaaatctgaccgcc
agcgaagtcactcgacggagcgccctgctctcctgggtacctcctgtgggagagatcgag
aactacgtcatgacctacagatccactgatggcagccggaaggagctgattgtggatgcc
gaggacacgtggatccgcctggaggggctttctgagaccacagagtacactgtgcgcctg
caagctgcccaaaatgccatgcggagcggcttcatctccactaccttcaccacaggcgga
cgtgtctttgctaaccctcaggactgcgcccagcacctgatgaacggagacacgctgagt
ggcgtctacaccatctccatcaacggggacctcagccagcgggtgcaggtgtactgcgac
atgaccaccgacggaggcggctggattgtcttccagaggcggcagaacgggctgaccgat
ttcttccggaaatgggcagattaccgggttggcttcggaaacttggaggatgagttttgg
ctgggcttggacaacatccacaagattacatcccaagggcgctacgagttgcgaatagac
atgagggacggccaggaagcagcatatgcctactacgacaagttctccgttggcgactcc
cggagcctgtacaagctgcgaattggggactacaacggcacttcgggggactccctcacc
tatcaccagggccgccccttctccaccaaggacagggacaacgatgttgctgtgaccaac
tgtgccatgtcctataaaggggcctggtggtataagaattgccaccgcaccaacctcaac
ggcaagtacggagagtcccggcacagtcaggggattaactggtaccattggaaaggccac
gagttctccatccccttcgtggaaatgaaaatgcgaccttacaaccaccgtaacatctct
gggaggaagcgacggtccctacagctctga
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