KEGG   Phaethon lepturus (White-tailed tropicbird): 104625067
Entry
104625067         CDS       T08325                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:plet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104625067 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plet03400]
    104625067 (TDP1)
DNA repair and recombination proteins [BR:plet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104625067 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 104625067
NCBI-ProteinID: XP_010290902
UniProt: A0A091TQJ1
LinkDB
Position
Unknown
AA seq 607 aa
MLQEGAHGKWTVSSSDESTEENSDGEKPSTSSLSDAARGRTSGPQYPCSEARKVAQKRKA
SPLKLSDKKVSTVIPPSEKQRTSQAGLGWCLSSSDEEPEDQEKHSHKETLKEEKCDASEE
HPLGLCEDDELSQNQKEEEYNETPIEAQDTWDLLNGGNPFRFFLTKVRGIEQSYNSGALH
IKDILSPLFGTLISSAQFNYCIDVAWLVRQYPQEFRKKPLLIVHGEKRESKAELIAQARP
YENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIAEDWHQKTQGMWLSPLYPK
LPQGTTGSAGESETNFKSDLISYLMAYNSPTLKEWIDLIQEHDLSETRVYLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEHASSIPAQESWPVVGQFSSIGSMGADGSKWLCSEFQESLVAA
GSSVTTLLKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHIWSAE
ISGRSHAIPHIKTYMRPSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLF
LPSAFGLDKDYFHVRGKMLSESNDSATYFPVPYDLPPKPYGSKDQPWIWNIPYTHAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggtgcacatggaaaatggacagtgtctagcagtgatgaaagtactgag
gaaaattctgacggtgaaaaaccgtctacatcttcactatcggatgctgcacgtggcaga
acaagtgggccacaatatccatgctctgaagctaggaaagttgctcagaagagaaaagct
tctcccctgaagctcagtgataaaaaggtttctacagtaatacctccatctgaaaaacag
agaactagccaagcaggcttaggctggtgtctttctagtagcgatgaagagcctgaagat
caggagaagcattcccacaaagaaacactgaaagaagaaaaatgtgatgcatctgaagaa
catcctctgggtctttgcgaagatgatgaactctctcagaatcagaaagaggaggagtat
aatgaaacacccattgaagcccaagatacctgggatttattgaatggaggaaacccgttc
aggttttttctcactaaagtcagaggaattgaacagagctataattctggagccctgcac
ataaaagatattttgtctcctctttttgggactctcatatcttctgcccagtttaactac
tgtatagatgtggcatggcttgtaagacagtatccacaggaattcaggaagaagccattg
ttgatagttcatggtgaaaaaagagaatccaaagctgaactgattgcacaagcacgccct
tatgagaacattagcttttgtcaggctaaactggatattgcatttggaactcaccatacg
aaaatgatgttgttgttatacgaagaaggtcttcgagttgtgatacatacatccaatctt
attgctgaagattggcaccagaaaactcagggaatgtggctaagccctttatatccaaag
ctacctcagggaacaactggttctgctggtgaatctgaaactaattttaaatcagaccta
ataagttacttgatggcttataattctcctacactcaaggaatggatagatctgattcaa
gagcatgatttatcagagacaagagtatatctgcttggttctacccctggacgatatcaa
ggtagtgataaagaaaagtggggtcatcttaggctcagaaagcttctgaaagagcatgct
tcgtcaataccagcacaggaatcctggcctgttgttggacagttctcaagcattggttca
atgggagctgatgggtccaaatggctgtgctcagaattccaggagagcctggtggctgca
ggcagcagtgtgacaactctccttaaatgcgatgttccaattcatttggtttatcctact
gtgaataatgtgaggcaaagtctggaaggctatcctgctggtggctcgcttccatacagt
atacagacagcacagaaacagctgtggttgcattcctattttcacatatggtcagcagaa
atctcaggtcgaagtcatgctatacctcacattaagacatacatgagaccctctcctgac
ttccagaagattgcatggttcttagttacaagtgccaatctgtctaaagcagcttgggga
gctctggagaaaaatggtacccaactgatgatacgttcttacgaacttggagtccttttc
ttgccttcagcatttggattggataaagattactttcatgtgagagggaaaatgctttca
gaaagtaatgattcagcaacatattttcctgtaccttatgacctgccaccaaaaccgtat
ggaagcaaagatcaaccatggatttggaatattccttacactcacgcccctgatacgcat
ggaaatatgtgggttccgtcgtga

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