KEGG   Phaethon lepturus (White-tailed tropicbird): 104625110
Entry
104625110         CDS       T08325                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03420  Nucleotide excision repair
plet04115  p53 signaling pathway
plet04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:plet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104625110 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104625110 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    104625110 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plet04121]
    104625110 (DDB2)
   03400 DNA repair and recombination proteins [BR:plet03400]
    104625110 (DDB2)
Ubiquitin system [BR:plet04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104625110 (DDB2)
DNA repair and recombination proteins [BR:plet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104625110 (DDB2)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR19_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd WD40_RFWD3 Beta-prop_TEP1_2nd PEP5_VPS11_N Beta-prop_Vps41 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 104625110
NCBI-ProteinID: XP_010290951
LinkDB
Position
Unknown
AA seq 515 aa
MAPVNQPKDKKHERAHEHCPEEAKAAGKRKPDYEELGNEPQAKRLFVRKTSKPPEKIGWS
GGGSVVRNNRVLFHQLGRQCSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPY
EAVKLYVASGDGTLSLQDLEGRAGQVISRAPDCGHEYHNVCCWYCSVDVSASCRAVVTGD
NVGNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKTN
FLHLLPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRRGGQRQANPGTS
KLKANLLSWELEEMRTKSNDSKSQGRKRKGKDLEN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggctccagtgaatcagccaaaggacaagaagcatgagagggcacatgagcattgtccg
gaagaggcaaaagcagctgggaagaggaaaccggactacgaggaactagggaatgagcca
caagcaaagaggttgtttgtgagaaaaacatccaaacccccagagaaaatcggttggagt
ggaggagggtccgtggtgagaaacaacagagtccttttccatcagctggggcggcagtgt
agcattgttcattatgtctaccagaacatgctgggaggctccattcgggcacagctcagg
cagtgtctgcagctgccctttctgcgttctctcgcctcataccgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggaatggcatccaacacaccccagtactgta
gctgttggttccaaaggtggagacatcatcctttgggactatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctctcggagacatcaagttcagtccttac
gaggcagtgaagctttatgtggcgtcaggggatggcaccctgagtctgcaagaccttgag
ggcagagcggggcaggtgatctcccgtgccccggactgtggccatgagtaccataatgtt
tgttgctggtactgcagtgttgatgtttctgcaagctgccgtgcagtggtgacaggtgat
aatgtgggaaacgtggtcctgcttagcacgtctggtgaagagatttggaagctgaaattg
cacaggaagaaagtgactcatgtggaatttaactcccgatgtgagtggttgttggccaca
gcgtctgtggatcagacggtcaaaatctgggacctcagaaacatcaaaaacaaaacgaat
tttcttcatttgcttcctcatgacaaacctgtcaatgcagcttacttcagcccaacagat
ggtgccaagcttctgagcaccgaccagcgcagtgaaatcagagtttactcgtcttcagac
tggaccaagccacagcatctgatcccacatccacatcggcagtttcagcacctcacacct
attaaggcaacatggcatcctcgctatgacctcattgtagcaggtcgctacccagaccct
aagttcccagggtacacggtgaacgaactacgaactgttgatgtatttgatggaaacacc
ggggagatggtttgtcagctccatgatccaaatgcttctggtatcatctcgctcaataaa
tttaaccctatgggagacacgctggcttctggcatgggctttaatattctgatctggagc
cgggaggagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagtttgtccagacgtggagggcagaggcaggcaaatcctgggacaagc
aaactcaaagctaacttactgtcttgggagctggaggagatgagaacaaaaagcaatgat
tctaaatcacagggaaggaagcgaaaagggaaggatctagagaactga

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