Phaethon lepturus (White-tailed tropicbird): 104625172
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Entry
104625172 CDS
T08325
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plet04812
]
104625172 (KATNB1)
Cytoskeleton proteins [BR:
plet04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104625172 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
eIF2A
Beta-prop_RIG_1st
RMC1_N
Beta-prop_WDR19_1st
PROPPIN
VPS8_N
WDR54
Beta-prop_VPS8
Beta-prop_IP5PC_F
Beta-prop_NWD2_C
Beta-prop_LRRK2
Beta-prop_WDR11_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104625172
NCBI-ProteinID:
XP_010291035
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
EITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLTGHTTPIESLQINTN
EELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPFGSFVASGSLDTNIKLWDV
RRKGCVFRYKGHTEAVRCLRFSPDGKWLASAAADHTVKLWDLAAGKIMFEFTGHTGPVNV
VEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFNPDGCCLYSGFQDSL
RVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSFAQSTVSSFVVDLSRVTKSGSIPHG
LIRDDEPLVPPTPTGSSLRRIYDRPSTSCNKPQSRVKHNSESERRSPSSEDDRDEKESKA
EIQNPEDYKEIFQPKNAICRTPPRNNEPFPAPPEEEPVTAKEALKPSQAADVQTPLPKQE
LPDPVQRPPIASSTPLTRTEPSVIPAARNEPIGLKASDFLPAVKNQSQTELVDEEAMSQI
RKGHETMCVVLTSRHKNLDTVRAVWSTGDIKNSVDSAVAINDLSVVVDLLNIVNQKASLW
KLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSVGVDISREE
RLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1937 nt
NT seq
+upstream
nt +downstream
nt
aagagatcacagctcacagcagcaatgtatcctcactagtcttgggcaaaagttcaggcc
ggctgctggcaactggaggagatgactgtcgggtcaacatatggtcagttaacaagccca
actgcatcatgagcttgacaggccatacaacgcccattgagagcctacagatcaatacga
atgaggagctcattgttgcagggtcccagtcagggtccattcgagtttgggacctggaag
ctgccaaaattcttcgtaccttacttggtcacaaagcgaatatctgcagccttgatttcc
atccttttggaagctttgtggcatctggctctttggacacaaacattaagctctgggatg
taagaagaaaaggctgtgtcttcaggtacaagggtcacacagaagcagttcggtgtctcc
gctttagtcctgatgggaaatggttagcctctgctgctgctgatcacactgtaaagctgt
gggatctggctgctgggaagataatgtttgagtttacaggacataccggcccagtaaatg
tggttgaattccatcccaatgaataccttttggcttctggcagctctgacaggactgttc
gcttctgggacttggagaagtttcaggttgtgagctgtattgaagaagaggctacgcctg
tcaggtgtgtgctcttcaacccagatggctgttgcttgtatagtggcttccaggattcgc
tgcgtgtgtacggctgggagccagagcgctgttttgatgtggtcttggtgaactggggaa
aagtagctgacttatctatctgcaacaaccagctgataggagtttcctttgcacaaagca
cagtctcttccttcgttgtggatctcagcagagtcacaaagtcgggttccattcctcacg
ggctgatcagggacgatgagcctcttgtgccgcctactcccacggggtcctctcttcgcc
gcatctatgacaggccctcaactagctgcaacaagccacaaagcagagtgaagcacaact
cggagagtgagaggcgcagtcccagcagtgaagatgaccgggatgagaaggaatcaaagg
ccgagatccagaacccggaggattacaaagagatcttccagcccaagaacgctatttgtc
gaactcctcctcgaaacaacgagccctttccagcccctcctgaggaagaacctgtaactg
caaaggaagcactgaagcccagccaagctgcggatgtccagaccccattgccaaagcaag
aacttcctgatccagtacagaggccaccgattgcctcctcaactcctttgaccagaacag
agccgtcggtgattcctgcagccaggaatgagcccattggcctgaaggcctctgactttc
taccagctgtgaaaaaccaaagccagactgagctcgtggatgaggaagccatgtcccaga
tcaggaaaggccacgagaccatgtgtgtggtgctcaccagccgtcacaagaatctggaca
ccgtgcgggctgtatggagcaccggtgacatcaagaactctgtggactctgcagtggcaa
tcaatgatctgtctgttgttgtggacctcttgaatattgtcaaccaaaaagcgtctctct
ggaagctggatttgtgtactatagttctgccgcaaatagagaaactactccaaagtaaat
atgaaagttatgtgcagaccggctgcacctccctgaaactcattctccagagattcctgc
cactgatcacagacatccttgctgcaccaccttctgtcggagtggacatcagcagagagg
aaaggctccataaatgcaagctgtgctacaagcagctgaaaaacatcagcaacattgtaa
agaacaagtctgggctcagtggccgccatggtagtgcctttcgggaactgcatctcctca
tggctgtcctggagtga
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