Phaethon lepturus (White-tailed tropicbird): 104625681
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Entry
104625681 CDS
T08325
Symbol
PCDH9
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9
KO
K16498
protocadherin delta 1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104625681 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plet01009
]
104625681 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plet04515
]
104625681 (PCDH9)
Protein phosphatases and associated proteins [BR:
plet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104625681 (PCDH9)
Cell adhesion molecules [BR:
plet04515
]
Cadherins
Protocadherins
104625681 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
104625681
NCBI-ProteinID:
XP_010291677
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAVHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFTIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSXXXXXXXXXXSDHFSASECSSQGGFKTKGPLHTRQ
VNEHFYWSISTAYKCPINQY
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggaactgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtttccagt
accacaggggaaatctttacaacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaatgagtgtttctttgaacttgaagtggtgattctccccaat
gatttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacggatcctgacacaggtttcaacggcgtacagcactatgag
ttgttaaatgggcaaagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgattgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaggtggaggatggaggtacccctcagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggtacat
ataccagagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttgaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctgttcacaaagtgacagtgctggctagtgatggtagctctacaccggct
cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaacggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcggtttacgacaaccagtatttg
ttagagacctcttccttattggactatgagggcaccaaagaattcagctttacaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aataaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggatgaaaatgacaacagtcccaagtttactcataatcacttccagtttttc
gtgtcggagaacttaccaaagtatagcacggtgggggtgatcacagtgaccgatgcggat
gctggggaaaataaagcggtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccatactctggagttataaagtccaatgtttcttttgatcgagagcagcagagctcc
tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttctacagcgaaa
gtaaccataaacgtcatggatgttaatgataacagccctgttgtcatctacccaccttct
aatacttcttttaagctagtgccactctcagcaattccaggatcggtggtagccgaagtc
tttgctgtggatatagacactggaatgaatgccgagcttaagtacacaattgtaagtgga
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaggaaaaa
ccaactcctaacgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggtgacagtagccaaccctaccaaaacgaggactatctcacgatcatgatcgccattgtg
gcaggtgccatggttgtcatagtggtgatatttgtcacggttctcgttcgctgtcgacat
gcatccagattcaaagctgcccagaggagcaagcaaggtgctgaatggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagttct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgccgttcatgaacctatc
aacgggacaataagccttccagcggagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttcagatcacttcagt
gcctcagagtgcagttcccaaggaggcttcaagacaaagggccccttacacaccagacag
gtaaacgagcacttttactggtctataagtactgcatacaagtgcccgatcaaccagtat
taa
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