Phaethon lepturus (White-tailed tropicbird): 104625975
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Entry
104625975 CDS
T08325
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104625975 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104625975 (THOC5)
03041 Spliceosome [BR:
plet03041
]
104625975 (THOC5)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104625975 (THOC5)
Spliceosome [BR:
plet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104625975 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
104625975
NCBI-ProteinID:
XP_010292100
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRSKGDADQDVRYYSEECEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKDNASEIDERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYKEAPPEISRPAITL
AEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDENVL
HLTFYYLMNLNVMTVKAKVTTAVEMTTAISAGDLLSPDSLLNCLYPGDHGRKTPNPANQF
QFDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNSLSASHMELTVKLLR
TRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWAAIPYEDYAELPYTKDVI
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPVFSLCLNWKGERNSSNDDNIRA
MESEVNVNYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDTSVEGPKEFPQEKMCLR
LVRGPMRLKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggactccagcaagaagaggaaacccaaagtgatccgcacagatgggggccca
caggagggcaagcggagcaagggtgatgctgaccaggatgttcggtactacagcgaggag
tgcgaggtggatctccgtgaccctatcaaagattacgaactctacagagagacttgccag
gagcttcagagactgatggcagaaattcaggagctgaagagcagaggcatcaaggacaac
gcttcagagatagatgagcggcggattcagagctgtgtgcacttcatgaccctgaagaag
ctcaaccggttggctcatattcggctgaagaaagggagagatcaaacccacgaggccaag
cagaaggttgacgcatatcacctgcagctccagaacttgctgtatgaggtgatgcacctg
cagaaagagatcaccaaatgcctggagttcaagtcaaaacatgaggagatcgaactggtg
agcctggaggagttttacaaagaggctccccccgaaatcagccggcctgccatcaccctg
gctgagccccaccagcagaccctggcccgcctggactgggagctggagcagcgcaagagg
ctggcagagaagtacaaggagtgcctgaccagcaaggagaagatcctgaaggagattgag
gtgaagaaggagtatctgagcagcctccagcctcgactcaacagcatcatgcaggcctcc
ctgcctgtccaggagtatctcttcatgcctttcgaccaggcgcacaaacagtatgagaca
gcccgacacctcccaccgcctctctatgttctcttcgttcaagccagtgcctacggtcag
gcctgcgataagaagcttgtggtggccattgaagggagcgtagaggaagccaaagccctg
tacaagccgcctgaggactcgcaggatgacgagagcgattctgacgcggaggaggagcag
accacgaagcggcgcaggcccaccctgggcgtgcagctggacgacaagcgcaaggagatg
ctcaagcggcaccccttgtctgtcaccgtcgacctgaagtgcaaagatgagaatgtgctt
cacctgaccttctactacctgatgaacctcaacgtcatgacggtgaaagccaaggtgacc
actgctgttgagatgaccaccgccatcagtgccggcgacctgctctccccggactccctc
ctcaactgcctctatccaggagaccacgggaggaaaacacccaacccggccaaccagttt
cagtttgataaagtgggcatcctgaccttgagtgactacgtgacagagctggggcacccc
tacgtgtgggtgcagaagctgggcggcctgcatttccccaaggatcagcctcagcacacg
gtcacagcagacaactcgctgagcgccagccacatggagctgactgtaaagctgctgcgg
acaaggctgcagtcccgcctggctctccacaagcagtttgcatcactcgagcacggcgtt
gtgccagtctccagcgagtgccagcatctcttccctaccaagatcgtctcgcgcctggtg
aagtgggctgccattccctatgaagattacgcggagctgccctacactaaagatgtgata
gaggccggcttggctgaggacactcacctctactacatggccctgatagaaaggggaaca
gccaagctccaggctgccgtcgtcctgaaccccggttactccacgctgccgcctgtcttt
agcctgtgcctgaactggaaaggagagcgaaacagcagcaacgatgacaacattcgggcc
atggagagcgaggtcaacgtgaactacaaggagttgtgggggcccaaaccgggttaccag
ctcctcaccaaccagctgcagcgcctctgcatggtgctggacgtctacctggagacggag
ccccacgacaccagcgtggaggggcccaaggagtttccccaggagaagatgtgtctgcgc
ctggtcagggggcccatgcgcctgaagcccttcaagttcaactaccctcaggggttcttc
agccatcgctga
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integrated database retrieval system
