Phaethon lepturus (White-tailed tropicbird): 104626018
Help
Entry
104626018 CDS
T08325
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-5-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plet03000
]
104626018
Transcription factors [BR:
plet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104626018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HIP1_clath_bdg
MATalpha_HMGbox
CENP-K
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
104626018
NCBI-ProteinID:
XP_010292129
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
LPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLG
PLQLQQLYAAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHADKSTNSPPPKSKDEVAQP
LNLSAKPKTSDGKSPTSPTSPHMPTLRINSGASSLKSSVPATLASPSARANTIDILSSIT
SSGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKDKTTLETLT
QQLAVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMV
WAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKY
KPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAG
MPSPMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGIKGEEPHIKEEMQTDDVNGEIYDE
YDEEEDDPDADYGSDSENHIAGQAN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
ctgcctccattaatgattcccgtattccctccagaccaacgaaccctagcagcagctgca
cagcaaggattccttcttcctcctggtttcagctacaaagcgggatgcagtgacccttac
cctgttcagctgatcccaactaccatggcagctgctgccgcagcaacaccaggcttaggc
ccactccaactgcagcagttgtatgctgcccaacttgctgcgatgcaagtctctccggga
ggcaagatacctggcataccccaaggtaaccttggtgctgctgtatcccctaccagcatc
catgcagacaagagcacaaacagccctccgcccaaaagcaaggatgaagtagcccagcct
ctgaacctttcagccaaacccaagacatccgatggcaagtctcccacatcacccacctct
cctcatatgccaactctgagaataaacagtggggccagttcactaaaatcctccgtgcca
gcaacattagctagtccttcagccagagctaacacaatagacatcctttcttctatcacg
tcgtcaggttatttaaatgaccacgatgctgttaccaaggcaatccaggaggcccgacag
atgaaggagcagcttcggagggaacaacaggtgctggatgggaaagtggccgttgtgaat
agcctgggtctcaataactgcaggacagaaaaggacaaaacaacactggagaccctgact
cagcaactggcagtaaaacagagcgaagacgggaagtttagccacgcaatgatggatttc
aacatgagtggagattctgacggaagcgcgggagtttcagagtccagaatttatcgggaa
tccagagggcgtggtagcaatgagccccatatcaagcgcccaatgaatgcattcatggtg
tgggctaaagatgaacggaggaagatccttcaagccttccctgacatgcacaactccaat
atcagcaagatactaggatctcgctggaaagctatgacaaacctagagaagcagccatac
tatgaggagcaggcccggctcagcaaacagcacctggagaaatacccagactacaaatat
aagccaagaccgaagcgtacctgccttgtagatggcaaaaaattacgcattggcgagtac
aaggctatcatgcgcaacagacgccaggagatgaggcagtattttaatgttgggcaacaa
gcacagattcccattgccaccgcgggtgtagtttacccaggagccattgccatggcaggg
atgccttccccaatggcaggaatgccttccccacatctgccctccgagcactcgagtgtg
tccagcagcccggagcccgggatgcccgtcatccagagcacttacggcatcaaaggcgag
gagcctcatatcaaggaagagatgcaaaccgatgacgtcaatggagaaatctacgatgaa
tacgatgaggaggaggatgaccccgatgcggactatggcagtgacagtgaaaatcacatt
gcggggcaagccaactga
DBGET
integrated database retrieval system
