Phaethon lepturus (White-tailed tropicbird): 104626276
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Entry
104626276 CDS
T08325
Symbol
SETX
Name
(RefSeq) probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plet03021
]
104626276 (SETX)
Enzymes [BR:
plet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104626276 (SETX)
5.6.2.5 RNA 5'-3' helicase
104626276 (SETX)
Transcription machinery [BR:
plet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104626276 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
nSTAND3
ResIII
DUF4164
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
104626276
NCBI-ProteinID:
XP_010292457
LinkDB
All DBs
Position
Unknown
AA seq
2620 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKSYASKRLSPEDLEGSNDDLCYCLECVVEYHKAREKLPRLHE
VLWELEISRLVAHIEKSMREESGEDNELFIVDENGETQLSGYVGPDFENNLRVPLLEILK
YPYLLLHEKVSELCVEVLCRMEQSHNSFQVFEKYPGIYLFLVHPNEAIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYSSSMIEKGKLILLPSHLYDTANYKNYWL
GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEAADDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSASYNNEIKNIRSSFKRTKSEPESDYNDDMVTCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHNSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKDILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVRCAKLPATAFTRCTEKSSGHCVRGSSSVSLQASNSVQHACVQLIRSLL
REGYQIGQHALCKQYLDKLNLLLRGNLSSGWQLNIQETQELQVCLKQVIRSIKDRALNTP
VPIGNNANSTTLPATSIKQEKSACGEGCKVSVHGRDALCSPFAVRPKEDGDEDCQENLFS
RRKSAWEEESIDTSKSSRSWTSTEGLLMNIKKEVDDFTTQEYDWPQNSLATKVCGKVQEN
RSNDLVAGKCNMDNQCFNPDVQHLDFRTSEELENKCEAGPITPMRLAVQTHVDSPEHVYS
SDVKQSNMSSSSSSKFKVDAYRLTNLKNKVQKTEWPSEVAQPAKPHHLKNCSLATSASKA
VVEQPKLCTGYLCTSKDCHKHQGVNSWCEKEISVDTLSSRSYESMQEKNTNSAFQSGLVP
TKHVSKETPLDCSSSSKNEPGMQENEDDRILLSGISDTLLKKVSTEEKSSSLLKSVFKKD
TDMQISDREQPNLNDLIKYDCKHQISKTFCMDKTSANGRVPSSSENKRDISNTASQIRPL
SMKCESSDRLFKFSEYFKRENNSVGKKEENFVKMVSEHNTLTDSQVDRELSKLSLAAYAT
SVNFPFDSSQESSVRHNVCGIKRKVKGAVRSSSDGQSTKSPCDADFLDNQVIIISDSSDE
EGDKEETKKKNENVCPEKQPPTSSCISGSDNKTESKTPSSPLSLEDCESQYFEFETEVDV
FSVWQDTQAYSTEATQEYKQDDVSTTADSSNSGGFLSDHTNEWGYDVDYVSGDTMEEEAS
LTEKQMENTSHQKEADDTKEVTNSALQESVSKGNAKDQLENFADKGTIAKDFTLDSKLTE
PRASTSNMSLASKLALKKNSASPRKNQAKSKVARTIQRSPKSFPVLKTVQSKKILQSTSR
NSQPGRSVPAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRTLESLAQLRSYGKAA
GRVGVAQKQKIKLIAPQSLSVKHNKKLLACQDLQFLRQTRPQKSVRVKNLAGSSESRNKK
VSKVDTRSMKQNPMKQNPRSFELASVEGSVENQREKKREETVCPFASERKFENLSVEEEM
CLSKMLSSSDLNRKLEDNSMMVPPVPMDSSVSSAALVAGDKDEPSGKGCIVQPEGEKTTS
KANGCKSDGNSEEDDDLFLTQLDPVDMELCSEEESVQDTTRTSKKTEEMDTTENLQQNDS
LTIVKCKYKDCVEKVEKPGEYCSKHSASSSDADHLFAKPSLLPPSKTRKPSTTKIFSSAS
SSRNAAFSKDLEDVKKLPPASKSKVNAVKPAVVRPPNAKAVPTGNQTCKSPSFSNVPQPC
ISNNVLQPQNRQNDNASNISRRPGREARYSFLGAQHRDHSIFVNEVLKWTYEMFANSSQF
GPPSNLLQSLVAPVPVQFQGYNDYFNTFFPLMMLNAFETLAQEWIENQRVREKSYYFYLQ
NNCAELNTADFTAHFRESDLARQLHPKEDDLIFLVVQKKKDTFREESEMENHIVSHVGLV
TRFSRASGCLTRQKEQHTVCHLSVQTRANLSFFVNKQVRCVVVGSLVTTHRTFKGLLLLS
RSPLAKPIINPSYNDFCPRDLPVASESAASDMNEYNEDQKRAIETAYAMVKQHPGLAKIC
LIHGPPGTGKSKTIVGLLSRVLRENTRNCKTTQKANSKIKPNRFLVCAPSNAAVDELMKK
IIVAFKEKCQNRQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQD
IQKKKAALDQKLDMLSRQRAMHRCEKRESQMLDDEIGRLSKERQQLASQLKEVRGHSQKV
QVDIILESDIICCTLSTSGGSLLESAFWRQGLDPFSCVIVDEAGQSCEVETLIPLIHRCN
KLVLVGDPRQLPPTVKSVKAQEYGYDQSLMARLHRHLEEQVQKNVLRSLPVVQLTVQYRM
HPDICLFPSSYVYGKTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERDNDSFSNPQEV
KLVMELIRTIKEKRKDLGLRRIGIITPYSAQKRKIQEQLDSVFKNNSPGEVDTVDAFQGR
EKDCIIVTCVRANSSKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMEQKSFHLYKCA
LSFALAAASSVGILFFLQWQHKLQIKAYEVCLVPVSPCDE
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacgcctagtggttctgacaccactgagttcctgaagagc
tatgcttctaaacggttgtccccggaagatcttgaaggatccaatgatgatctctgttac
tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaaggttgcatgag
gttttgtgggagttggaaatttcccgtcttgtggcccacattgagaaatctatgcgtgaa
gaatctggagaagataatgagttgtttatagtggatgagaatggagagacacagctgtct
ggttatgtgggcccggattttgagaataatctgcgagtgccccttctagaaatactgaaa
tacccatatctgctgctgcacgagaaagtcagtgagctctgtgtagaagtgctctgtaga
atggaacagagtcacaactcctttcaggtctttgagaaatatccaggaatttatctcttt
ttggtacacccaaatgaagcgattcgtcgatgggccatcctaacagcaaggaatttagga
aaggttgacagggatgattactacgacttacaggaagtgctgacttgcttgttcaaagtt
attgagttggggctttttgagagtccagatatttacagctcttcaatgattgaaaagggt
aaactcatccttctgccgtctcatttatatgatactgccaactacaagaactattggcta
gggatttgtatgttgctaacggtgctggaagaacaagctatggactccttgttactgggc
ccagacaaacaaaatgatttcatgcagtctatacttcacaccatggagaaagaagcagct
gatgattctactgaccccttctggccagcgcttcattgtttcatggttattttggatcag
ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgcgagctacaacaatgagataaaaaatatacgcagtagctttaagaggacaaaa
tctgagccggagtcagactacaatgatgacatggttacttgcagtcagattgtttataat
tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac
tgccccaacatgtatgaagatatgcaaacgctggctaatgtgcttcagtctgatattggc
agagatatgcgtgtccataacagcacgtttctgtggttcatcccttttgttcagtcgctt
atggatctcaaggacttgggtgtagcgtatatagtggaggtcattcactacctctgctcg
gaaatcaaagatattctcaatgagagaatccagcagtgtgacaaaatttcagaatttttt
ctcctgatcttggtgtccattattgaactacacagaaataaaaagtgcctgcatttgcta
tggattagctcccaagagtgggtggaagcagtggtgagatgtgctaagcttccagctacc
gcatttacacggtgcactgaaaaatcatctggacactgtgtgagaggttcatcatcagta
tctttacaagcttctaactctgtgcagcacgcctgtgtgcagttgatacgcagccttctt
agagaagggtatcaaattggccagcatgctctttgcaagcaatacctagacaaactcaat
cttcttctacgaggaaatctgtcttcgggttggcagctgaacatccaggaaacccaggaa
ttacaagtgtgtctaaaacaagttataagaagtataaaggacagagcattgaatacccct
gtgcctataggaaacaatgcaaactctacaactttgcctgccacttctataaagcaagag
aagagtgcatgtggtgaaggatgcaaggtgagtgtacatggtagagatgccctttgttca
ccatttgctgtcagaccgaaagaagacggagatgaagattgtcaagagaacctattctct
agaagaaagagtgcctgggaagaggaaagtatagatacatctaaaagttcaagatcttgg
acatccacagaaggcctcttgatgaatattaaaaaggaagttgatgactttacaactcag
gaatatgactggccacagaactctttggcaacaaaagtatgtgggaaagttcaggaaaac
aggagcaatgatcttgtggctgggaaatgcaatatggataatcagtgctttaatccagat
gtccagcatttagatttcagaacaagtgaagagttggaaaacaaatgtgaagcaggaccc
ataacaccaatgcgtctggctgttcagactcatgttgattctccagaacatgtttacagc
tcggatgtaaaacaaagcaatatgtcttccagttcctcttcaaagtttaaggtagatgca
tatagactcacaaatttgaaaaacaaggtacagaaaactgaatggccctcagaagtagca
cagccagcaaagccgcaccacttgaaaaactgcagtttagcaacaagcgcttcaaaagca
gtggtagagcaacctaagctttgcactggctatctgtgtacaagcaaagattgtcataaa
catcagggagtgaattcttggtgtgaaaaggaaatctctgttgatactctatcttcaagg
agttatgaaagtatgcaggaaaaaaataccaacagtgcttttcaatccggactggtcccc
actaaacatgtatcaaaggaaacaccgttagattgctctagctcctctaaaaatgaacct
ggtatgcaggaaaatgaagatgaccgtattttgctttcagggattagcgacaccttgctg
aaaaaagtatccactgaagaaaaatcaagttcactgttaaagtctgtgtttaagaaagac
actgacatgcagatttcagaccgggaacagcctaatttaaatgacttgattaaatatgac
tgtaaacatcaaatttcaaagacattttgtatggataaaacgtcagcaaatggtcgtgtt
ccatctagctctgaaaataagagagatatatccaacactgcttctcagatcaggccactg
tcaatgaagtgtgaatcaagtgataggttgttcaagttttcagagtatttcaagagagaa
aacaattcagtggggaagaaagaggaaaattttgtgaagatggtttctgaacataatact
ttaacagactcccaggttgatagagaactcagtaaattatctttagctgcatatgccaca
agtgtcaattttccctttgattcaagccaagaaagctcagtacgtcataatgtatgtggt
attaaaaggaaagtgaaaggtgctgtaagatcttccagtgatggccaaagtaccaagtct
ccctgtgatgcagatttccttgacaatcaagtcattataatttcagactcttcagatgaa
gaaggtgacaaggaggaaacaaaaaaaaagaatgaaaatgtgtgtcctgaaaagcagcct
ccaacttccagctgcatttctggtagtgataacaaaacagaatcaaagacaccaagttct
cccttgtcactggaagactgtgagtctcagtactttgagtttgaaacagaagttgatgtc
ttctcagtttggcaagatactcaagcatatagtacggaagcaactcaagagtataagcaa
gatgatgtttcaacaacagctgatagcagtaattcaggtggctttctgagcgatcacaca
aatgaatggggttatgatgtggattacgtaagtggtgataccatggaggaagaagcaagc
ttgacagaaaagcagatggaaaatacttctcatcagaaagaagctgatgatacaaaagaa
gtaactaattcagcactgcaagaatctgttagtaagggaaatgcaaaagatcagctagag
aattttgcagacaaaggtactattgctaaagacttcaccctggactcaaaattgactgaa
ccccgagcatctacatctaacatgtcattagcttcaaagttggcccttaagaaaaatagt
gcgagcccaaggaagaatcaagcaaaatctaaggtagcaagaactattcaaagaagtcct
aaaagctttcctgttcttaaaacagtacaaagtaaaaaaatacttcaaagtacatcaaga
aattctcaacctggcaggtcagtgcctgctgtggttcctccaaggaaagttcggcagtgc
cctgcaccagcatcaactgtagaaaaacttggtctgaagaaggcgccccgcaaggcgttt
gaattatcccaacgcactttagagagcctagctcaattgcgcagctatggtaaagcggca
ggaagagttggagtcgcacagaaacagaagattaaactaattgctcctcagagcttgtct
gtaaaacataacaaaaaattgctagcctgccaagaccttcagtttttaaggcagacaagg
cctcaaaaaagtgtgagagtgaaaaatcttgcaggaagttctgagagtagaaacaaaaaa
gttagcaaagtggatacaagatctatgaaacaaaatcctatgaaacaaaatcctagaagc
tttgaactggcttctgtcgaaggatctgttgaaaaccaaagagagaaaaaaagggaggag
actgtttgtccctttgccagcgagagaaaatttgaaaacctctctgtggaggaggaaatg
tgtctctctaaaatgcttagttcttcagacttgaacagaaaattggaggataacagtatg
atggttcctcctgtacctatggattcaagtgtctcttctgctgcacttgttgcaggtgat
aaagatgaaccctcgggaaaaggttgcattgtccagcctgagggtgagaagacaacttca
aaagcaaatgggtgtaaatcagatggaaacagtgaagaagatgatgatctatttttaact
cagttagatcctgtggatatggaattatgttctgaggaggaaagtgttcaagatactact
aggactagtaaaaaaacagaggaaatggatactactgaaaaccttcagcagaatgactcc
ttgactattgtgaaatgtaagtacaaagactgtgtggaaaaagtggaaaaaccaggagag
tactgtagtaagcattcagccagcagctcagatgcggatcacttgtttgccaaaccttct
ctcctgccaccttctaaaacaagaaagccttccactaccaaaattttcagctcggcaagt
tcttcacggaatgcagccttcagcaaggatcttgaagatgttaaaaagctacctccagct
tcaaaaagcaaagtgaatgcagtgaaaccggcggtggtcaggccaccaaatgctaaggct
gtaccaacagggaatcaaacatgcaagtctccaagtttcagtaatgtacctcaaccctgt
atttctaataacgttctccagccacaaaatagacagaacgacaatgcttcaaatatttct
agaaggcctggacgagaagcacgttattcttttcttggcgctcagcatcgtgatcatagt
atttttgttaatgaagtcctaaagtggacttacgaaatgttcgcaaactccagccagttt
ggacctccaagtaatctcctgcagtctctagtagcccctgttcctgtccaatttcaggga
tacaatgactattttaatacatttttccccttgatgatgctaaatgcctttgaaacgctg
gcacaagagtggatagaaaaccagagagtaagagagaagagttactacttctacttacag
aacaactgtgccgaattgaatacagcagattttacagctcattttcgagaaagtgatttg
gcaaggcagcttcatccgaaggaggatgacttaatctttttggtggtccaaaagaaaaaa
gacacctttagggaagaaagtgagatggagaaccacatagtgagtcacgttggtcttgtg
acacgattttctcgtgcatctggctgtttaaccagacaaaaggagcagcatacagtctgt
catctttctgtgcaaacccgagccaatttgtcattctttgtaaataagcaagtgaggtgt
gtggtggttggctccctggtgaccacacaccgaacattcaaaggtctactactattgagc
aggagtcccctggctaaacccatcataaatccaagttacaacgacttctgtcccagagat
ttgcccgtagcttcagaaagtgctgcctcggatatgaatgaatacaacgaagatcaaaag
agagccattgagacagcttatgccatggtaaagcaacatccagggcttgccaagatctgc
ctcatccatggaccacctggaacagggaaatcaaaaactattgttggacttctgtctcgt
gttttgagagaaaacactaggaattgcaaaacaactcaaaaagcaaattccaagatcaag
ccaaaccgttttctagtttgtgcaccatcaaatgctgctgttgatgaactcatgaaaaag
atcatcgttgcatttaaggaaaaatgccaaaacagacaggagcctttggggaattgtggt
gatatcaaattagtgcgacttggtgctgaaaaagcaatcaacagtgaagtccggggattt
agcctggataagcaagttgaacacagaatgaaacgaaagccagctgactgtgaccaggat
attcagaagaagaaagcagctctggatcaaaagctggacatgctgtctcgtcagcgtgcc
atgcacagatgtgagaagagggagagtcagatgttagatgatgaaattggcagactttca
aaggagagacaacagcttgcttctcaactaaaggaggttcggggccactctcagaaagta
caagtggatatcatcttggagtccgacatcatctgctgcacgctgagcacgagcggagga
agtctgctggaatctgctttttggaggcaaggacttgatcctttcagctgtgtcattgtg
gatgaggcagggcagtcctgtgaggttgaaacactgattccactgatccatcgctgtaat
aaacttgtccttgttggagatcccagacagctccctcctactgtaaaatcagtaaaagct
caggaatatggctacgatcagtccttgatggcacgcctgcacagacacttggaggagcaa
gtgcagaagaatgttttacggagcctgccagttgtgcagctgactgtgcagtacaggatg
caccctgacatctgcctcttcccgtccagttatgtttatggcaagaccctaaagactgac
aaagcaacagaagagaacagatgctcttcagagtggccattccagccctaccttattttt
gatgtaggagacggtcgtgaggagcgggacaatgactcctttagtaatcctcaggaagtg
aagctggtgatggaattaattagaacaattaaagaaaaaaggaaagatctgggtcttcgt
cgcattggaataattaccccttacagcgcacagaaaaggaaaattcaagaacaactggac
agcgtgtttaagaataacagcccaggagaagtggacacagtggatgcattccaaggacga
gagaaagactgcatcatagtgacatgcgtccgggcaaacagcagtaaagggtcaattggg
tttctggcaagtcttcaacgtctgaacgttacaattacccgagccagattcagccttttc
atccttggaagactgaaaacgctcatggagcagaagagctttcatttatacaaatgtgcc
ttgagttttgctcttgctgctgcatcatcagttggaatccttttcttcttgcagtggcaa
cacaaactgcagattaaagcctacgaggtgtgtttggtcccagtgagtccatgtgacgaa
taa
DBGET
integrated database retrieval system
