Phaethon lepturus (White-tailed tropicbird): 104626353
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Entry
104626353 CDS
T08325
Symbol
FN1
Name
(RefSeq) fibronectin
KO
K05717
fibronectin 1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04510
Focal adhesion
plet04512
ECM-receptor interaction
plet04518
Integrin signaling
plet04810
Regulation of actin cytoskeleton
plet04820
Cytoskeleton in muscle cells
plet05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104626353 (FN1)
04518 Integrin signaling
104626353 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104626353 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104626353 (FN1)
04810 Regulation of actin cytoskeleton
104626353 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104626353 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104626353 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plet04147
]
104626353 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
plet00536
]
104626353 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
plet04990
]
104626353 (FN1)
Membrane trafficking [BR:
plet04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
104626353 (FN1)
Exosome [BR:
plet04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
104626353 (FN1)
Glycosaminoglycan binding proteins [BR:
plet00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104626353 (FN1)
Domain-containing proteins not elsewhere classified [BR:
plet04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
104626353 (FN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Fn3_PBP1
fn2
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Fn3_VIN3
FN3_Tor_3rd
TILa
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
104626353
NCBI-ProteinID:
XP_010292556
LinkDB
All DBs
Position
Unknown
AA seq
1635 aa
AA seq
DB search
TCFDNGKYYHINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGE
TYERPKDSMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCL
GNGKGEWTCKPVAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNR
CNDHDTKTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLHTTSTGSGSPSFTN
VQTALYQPQPQQPQPQPYGQCITDNGVVYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAV
TQTYGGNSDGEACVLPFTYDGRTFYSCTTEGRTDGHLWCSTTSNFEQDRRYSFCTEQNVL
VQTRGGNSNGALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHE
EICTTNDGVMYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDV
NQTFHKRHDEGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQC
YCYGRGIGEWHCQPLQTYPGSTGPVQVIITESTNQPNSHPIQWNAPERSHITKYILRWRP
KNSGRQWKEATIPGYQNSYTISGLKPGVIYEGQLISVQRYGHKEVTRFDFTTTSTTAVTS
NTVSGETTLLPPVVATSESVTEITANSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDL
PSTATSVNIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPDHTVESVDDTSIV
ISWSRPQAPITGYRIIYTPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQE
STPVFIQQETTGVPRTDEVPSPKDLQFVEVSDIKITIMWTPPQSQVSGYRVEVIPVNRPG
QHGQRLPITRSSFAEVVDLLPGTTYLFKIFAVSHGRESKPLTGEQTTKLDAPTKLRFLNT
TEHSVLVLWTRPRAVITGYRLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVA
VKDDLQSARETGVFTTYQPAGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAP
REVISDSGSIVISGLTPGVEYTYSLTVLMDGQERETPIIRRVTTPLSPPTNLRLEPNPDT
GILVVSWDRSTTPGISGYRVTTAPTSGQQGSTLEEVVGADQTTCTFENLNPGVEYNVSVY
SVKDDQESIPISETITQEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGES
VPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTN
VGPDTMRVTWTAPTSIVLSSFLVRYSPVKKEEDVAELTISPSDNMVILTNLLPGTEYLVR
VYSVSEQHESAPLSGIQKTGLDSPTGLDFSDITANSFTVHWMAPRATIMGYKIRHHPEHG
AGRPKEDRVPPSRNSITLTNLLPGTEYVVSIIAINGREESVPLVGQQTTVSDVPRDLEVT
PTSPTSLVISWDAPAVTVRYYRITYGETGGSSPVQEFTVPGTMSTATITGLKPGVDYTIT
VYAVTGRGDSPASSKPVTVTYKTEIDTPSQMQVTDVQDNSISIRWLPSTSPVTGYRVTAV
PKKGHGPTKTKNVPA
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
agacctgttttgacaacggaaaatactaccacataaaccagcagtgggagcgcatttacc
tgggaaacacgctagtctgtacctgctacggtggaagcagagggtttaactgcgaaagca
agcctgaacctgaagagacttgctttgacaaatacactggatccacttaccgagtagggg
agacatacgagcgccccaaggactccatgatctgggactgtacttgcattggagctggtc
gagggagaatcagctgcaccattgccaatcgctgccatgagggtggccagtcctacaaga
ttggcgatacctggcgccggcctcacgagactggcggctacatgctggagtgcgtgtgcc
tcggcaacgggaagggcgagtggacctgcaagcctgtggctgagcgatgctacgacaaca
cagccgggacgtcctacgtggtcggtgagacctgggagaagccctaccagggctggatga
tggtggactgcacctgcctgggggagggcagcggccgcatcacctgcacctccagaaatc
ggtgcaatgaccatgacaccaagacttcctacagaattggagacacctggagcaagaagg
ataaccgtggaaatttgcttcagtgcatctgtactggtaatggcagaggtgaatggaaat
gcgaaagacacacatccctgcatacaactagcactggatctggctctcctagcttcacaa
atgtgcagactgcgttgtaccagccccagcctcaacagccgcagcctcagccctatggcc
agtgcataactgataacggagtggtgtactctgtgggtatgcagtggctcaagactcagg
gcagccagcaaatgctttgtacctgcctgggtaatggagtcagctgccaggaaatagctg
tgacccaaacgtatggtggcaattctgatggagaagcctgtgttctgcctttcacctatg
atggaaggactttctattcctgcaccaccgaaggccgcacagatgggcacctctggtgca
gcaccacttccaactttgagcaggacaggagatactccttctgtactgagcagaatgttt
tggtccagacacgtggcggcaattccaatggtgctctgtgccacttccctttcctgtaca
acaatcgcaactacactgattgtacttctgagggacggagagacaacatgaagtggtgtg
gaaccactgagaactatgacgctgaccagaaatttggtttctgccctatggctgcccatg
aagaaatctgcacaaccaatgatggtgtcatgtaccgtgttggggaccagtgggataaac
aacatgacatgggccatatgatgagatgtacttgtgtaggaaatggccgtggagaatgga
cttgcattgcctattcccagctcagagaccagtgcattgtggatggtatcacctatgatg
tgaaccagaccttccacaagcgtcacgatgaggggcacatgctgaactgcacatgctttg
gccagggccgggggagatggaaatgcgatcctgttgatcagtgccaggattcagaaaccc
gtaccttttaccaaatcggagattcatgggagaaatacgtccatggtgtcagataccagt
gctattgctatggtcgtggtattggagaatggcattgccagcctctgcagacctatcctg
ggtcaactggacctgttcaggtgatcatcacagagagtacaaatcagccaaactcacacc
ccatccagtggaatgctcctgaacgatctcacatcaccaagtacatcttgcgctggagac
cgaaaaactctggaaggcagtggaaggaagccaccatccctggctaccagaactcttata
ccatctcaggcttgaagcctggtgtgatatatgaaggacagctcatcagtgttcagcggt
atggccacaaagaagtcactcgctttgattttaccacaacaagcaccacagcagtgacaa
gcaacactgtttcaggagagacaactcttcttcctcccgtggttgctacttcagagtcag
tcactgaaatcacagccaacagctttgttgtttcctgggtttctgcttctgacacagttt
ctggattccgcgttgagtatgagctgagcgaggagggcgatgagccacagtatcttgatc
ttccaagcacagccacttctgtcaacatccctgacttgcttcctggtcgcaagtatattg
ttaatgtctatcagatctctgaagaaggagagcagaatctgatcctgtctacttcacaga
ctacagctcctgatgcacctcctgatcacaccgtggaaagtgtagatgacacatcaattg
tcattagctggagcagaccacaggctccaatcacaggctacagaattatctacacaccct
ccgtggaaggcagcagcacagagctcaacctgcctgacactgctacctctgtaacgctca
gtgacttgatgccaggtgttcagtacaacatcagcatctacgcagtggaagaaaatcagg
agagtactcctgtcttcatccaacaggaaaccacaggcgtcccacgcacagatgaagttc
cttcacctaaagatctgcagtttgtggaggtttctgatatcaagatcaccatcatgtgga
cgccaccgcagagccaagtgtctggctatcgagtggaagtgatccctgtcaatcgccctg
gccaacacggtcagagactgcccatcaccaggagctcttttgctgaagttgttgacctgc
tcccaggaacaacctatctctttaagatctttgctgtgagccacggcagggagagcaaac
ctttgactggagagcaaaccaccaagctcgatgcccccaccaaactgagatttctcaata
ccacggagcattcagtgttagtgttgtggacgcggccccgtgctgtgatcacaggatacc
ggctgactgcaggtcccacaagaggaggtcagccaaggacctacaatgtgggaccttctg
ccaccaagtaccttctcaggaacttgcagcctggtacggagtataccgtgtaccttgtgg
cagttaaggatgacttgcaaagtgccagagagactggagtcttcacaacttatcagcctg
ctggctctgttcctccttttaacacagaagtgactgagacttctattgtcatcacctgga
cacctgccccaaggattggtttcaagctgggtgtgcgcccaagccaaggtggagaggctc
cccgggaggtcatctctgattctggcagcatcgtgatatctggcctgactcctggagtgg
agtacacctacagcctcacagtcctgatggacggccaggagagagagactccgatcatca
ggagagtgactacaccattgtctccaccaaccaacctgcgcctggagcccaatcctgata
ctgggatcctggtagtctcttgggatagaagcacaactccaggcatcagtgggtaccgag
tgaccactgctcctaccagtgggcagcagggctctaccttggaagaagtagtaggtgcag
atcagaccacctgcacctttgaaaacctgaaccctggtgtggagtacaatgtcagcgttt
actcagtcaaggacgaccaggagagtatccccatctctgaaaccatcacacaagaggtgc
cccaactcactgacctaagctttgttgatataactgattcaagcatcggcctgaggtgga
ccccgttaaatgcctccaccattattggctaccgcatcacagtagttgcagcaggagaaa
gtgtccctatttttgaagattttgtggactcctcagtaggatactacacagtcacaggct
tggagccgggcattgattacgacatcagtgtaatcacactcattaatggcggagagagcg
cccctaccactctgacacagcaaacggctgtgcctcctcccactgatctccgttttacta
atgtggggcctgatactatgagagtgacttggaccgcaccaacttccattgtgctgagca
gtttcttggtgcgctactcacctgtgaagaaggaggaagatgttgcagagctgacaattt
caccctcagacaacatggtgatcttaacaaatctgctccctggtactgaatatctggtga
gagtctacagtgtttctgagcaacatgaaagtgcacctttgtctggaatccagaaaacag
gtctcgactcccccactggccttgacttctcggatataactgctaactctttcaccgtcc
actggatggctcctcgtgccaccattatgggctacaaaatcaggcatcacccagagcatg
gtgctggcaggcccaaggaggaccgcgtgcccccctcacgcaactccatcacccttacca
acctgcttccagggaccgagtacgtggtcagcatcattgccatcaatggcagggaggaga
gcgtgcccttggttggccaacaaacaacggtgtctgatgttccaagggacctggaagtca
cccccaccagcccaaccagccttgtgatttcctgggatgctcctgcagtgacagtcagat
actaccggatcacttatggtgaaacaggtggaagcagccctgtgcaggagtttacagtgc
ctggcaccatgtccaccgctaccatcactggcctcaaacctggcgtagactacaccatca
ctgtgtatgctgtaaccgggcgtggagacagccctgccagtagcaagccagtcactgtca
cctacaaaacagaaatagacacaccatcccagatgcaagttaccgatgtccaggacaaca
gtatcagcatcagatggctcccttcaacatcgccagtcacagggtatcgagtgacagctg
tccccaagaaaggacatgggcccacaaaaactaaaaatgtccctgcag
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integrated database retrieval system
