Phaethon lepturus (White-tailed tropicbird): 104626868
Help
Entry
104626868 CDS
T08325
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104626868 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plet01009
]
104626868 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plet04515
]
104626868 (PCDH1)
Protein phosphatases and associated proteins [BR:
plet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104626868 (PCDH1)
Cell adhesion molecules [BR:
plet04515
]
Cadherins
Protocadherins
104626868 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
K319L-like_PKD
TMEM154
MLANA
Mid2
Syndecan
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
104626868
NCBI-ProteinID:
XP_010293198
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
PLQRRMKPLASCLGLWLLFQLPDLVSGTRVVYKVQEEQPPNTLIGRALASDYGFPDVGHL
YKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITDLILNSSP
RLLEGQIEVLDINDNTPNFASPVLTLSIPENTGPTPPRASSALLRITILDMNDNAPKFEK
ALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRTTGLITVQ
GPIDREDVNILKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMA
NISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTT
PLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPD
DLVMEVSASDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLV
VAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKG
ENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVT
INVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGVNAELTYSITGGNPF
ELFQISPHSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLL
DTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREA
KSGYQAGKKETKDLYTPKQASKSGKSKSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMN
DSVSDSPRIHLPLNY
NT seq
2567 nt
NT seq
+upstream
nt +downstream
nt
ctcccctgcagcgcaggatgaaaccgctggcatcctgcctgggcctgtggctcctcttcc
agctccctgacctggtctctgggacgcgtgtggtctacaaagtgcaggaggaacaacccc
ccaacaccctcatagggagggcgctggcctctgactatggcttcccggacgtgggacacc
tttacaagctggaagtgggggccccgtacctacgtgtggatggcaagaccggggacatct
acaccacggagacctccatcgatcgggagagcttgcgtgagtgccagcacctcctgcccg
gagagccctgcttcctggagttcgaagtgtctatcactgacctgatcttgaacagcagcc
cacgcctgctcgaggggcagatagaggtgcttgatatcaatgacaacacccccaactttg
cctctcctgttctcaccctctccatcccggaaaacaccgggcccaccccgccgcgggcga
gcagcgccctgcttcgcatcaccatcctggacatgaacgacaacgcgcccaagttcgaga
aggccctgtacgaggcggagctctccgaaaacagccccgtggggcactccgtcctccagg
tgaaagccaacgactccgaccagggtgccaacgccgaaattgactactctttccaccaag
cctccgacatggtgcgccggctgctgcgcctggaccgcaccacggggctcatcaccgtgc
aggggcccatcgaccgcgaggacgtcaacatcctcaagttctctgtcatggccaaggaca
agggggccaaccccaagagtgctcgcacccaggtggtggtcaccatcaaggacatgaacg
acaacgcgccctccatagagatccggggcattgggctcgtcacccaccaggatggcatgg
caaacatctcggaggacgtgccagtagagacagcagtggccctggtacaggtgtccgacc
gagatgagggcgaaaacgccgtggtgacctgcgtggtggctggtgatgtcccgttccagc
tgaggcaggctagtgaaacagggagcgacagcaagaagaaatacttcctacagactacca
cgccgctcgactatgagtcggtgaaggagtacactattgagattgtggcggtggactcgg
gcaacccacccctctccagcaccaactctttgaaggtgcaggtggtggacgtgaatgaca
acgcgcctgtcttcagccagagcttcactgaggtggccttccccgagaacaatgagcccg
acgacctggtgatggaggtaagcgccagcgatgctgacagtggctccaacgccaagttgg
tttactccctggtgacggacccctcctccaagggttccttcaccattgaccccgactccg
gggagatccgggtgaaggcggtgctggaccgagagcagcgggagcgctacgagttcttgg
tagtggcggcagacaagggcagccccagcctcaagggcacagcgtctgtggccatcaacg
tcatggacaggaatgacaacgaccccaagttcatgctgagcggctacaacttctcggtga
tggagaacatgccgcccctcagccctgtgggcatggtgacggtgatcgatgctgacaaag
gagaaaatgcccgcatccagctgtcggtggagcaagacaacggggattttgtcatccaga
atggcactggcaccatcctctccagcatctcttttgaccgggagcagcagagcacataca
ctttccgactcaaggcggtggatggaggggatcctcccaggtctgcctatgtgggggtga
ccatcaatgtcttggatgagaatgataatgctcccttcatcacatcaccctccaatgcca
cctacaaacacatcctgccccacaccagccctggccagcaggtgagcaaggtcaaggcgg
aggacattgactccggagtcaacgcggagctgacctacagcatcacaggaggcaacccct
ttgagctcttccagatctccccgcacagtggagacatcaccctggagaaggagatcctgc
gcaagcaccatggcctgcaccgcttggtagtgcgcgtcaacgacaagggcaagccctcac
ggcacggcacggcgctggtgcacttctacgtcaatgagacgctggccaaccgcacgctgc
tggacacactggtggggcacagtctggacacaccgctcgacatagacatcgccggagacc
ccgaatacgagcgcagcaagcagcgaagcaacatcctcttcggagtcatcgctggcatcg
tggccgtcaccctggtcattgtgctggttgtcctggtgcgctactgccggcagcgagagg
ccaagagcggctaccaggcaggcaagaaggagaccaaggacctgtacacacccaagcagg
ccagcaagagtggtaagagcaagagcaaggtgaagaagagcaagtctccgaagccgccca
agcccacagaggatgaggaggagacggggctgcagaaatcgctcaagttcaacctcatga
atgactctgtcagcgacagcccccgaattcacctgcccctcaactac
DBGET
integrated database retrieval system
