Phaethon lepturus (White-tailed tropicbird): 104627003
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Entry
104627003 CDS
T08325
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04137
Mitophagy - animal
plet04140
Autophagy - animal
plet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104627003 (HIF1A)
04137 Mitophagy - animal
104627003 (HIF1A)
04148 Efferocytosis
104627003 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plet03000
]
104627003 (HIF1A)
Transcription factors [BR:
plet03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104627003 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HIF-1a_CTAD
PAS_3
PAS_11
HIF-1
PAS
PAS_9
DUF4350
Motif
Other DBs
NCBI-GeneID:
104627003
NCBI-ProteinID:
XP_010293374
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQAT
VIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMKMTKTFSKDDLDD
TNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDVMLPSSSEKLQ
NINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPLELSFTMPQVQEQPTSPSDA
STSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAIDTEAKNPFSTQETDLDLEMLAP
YIPMDDDFQLRSFDQLSPLESSSSGSQNGATITIFQQTQTPSSTADEIKPVTERVDDVKT
LIVPSSPVHLISETSSAPASPYGGNRSRTASPIRAGKGTLDQTEKSCPGAPSLLTVTLNK
RSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQQTGDRGGNASLAWKRVKG
CKTNGRNGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPIQGNRNLLQGEE
LLRALDQVN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggatatgagccagaggaactcctgggtcgctccatctatgagtactatcatgcactg
gattctgatcatctgaccaaaacacaccatgacatgttcacaaaagggcaggtgacaaca
ggacagtacagaatgcttgctaaacaaggtggctatgtctgggttgaaactcaagcaact
gttatatacaacactaagaattctcagccacagtgcatagtgtgcgtaaactatgtgttg
agtggaattgttcagaaggacttgattttttcccttggacaaactgagtgtatgctgaaa
ccagtggagtctcctgatatgaaaatgaccaaaacattcagcaaagatgacctggatgat
accaacagtctttttgaaaaacttaagcaggaaccagatgctttaactgtgctggcccca
gctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaacaacaa
tgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaattgcag
aatataaatatggcaatgtccccactacctgcttctgaaactacaaagccacttcgtagc
aatgctgatcctgcacttaatagagaagttgtatcaaagctggagccaaacacagagcca
cttgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttctgatgca
agtaccagccaaagttcacctgagcccagtagtcccaacgactactgctttgatgtggat
aatgatatggctaacgaattcaaactggaattagtggagaaactctttgcaatagataca
gaagcaaaaaatccattctctactcaggaaactgatttagacttggagatgttggctcct
tacatcccaatggatgatgacttccagttgcgctcctttgaccagctatctccactggaa
agcagttcttccggctctcaaaatggagccaccattaccatatttcagcagactcagaca
ccatccagtactgctgatgaaataaaaccagtgacagaacgtgtagatgatgtgaagacg
ctaattgttccttcatctcctgtccacctaatcagtgaaacgagtagtgccccagcatca
ccttacggtgggaacaggagtcgaactgcgtctccgatcagagcaggaaaaggaacattg
gatcagacagaaaaatcttgtccgggagcacccagtttgctaacagtcactctgaacaaa
agatctactgcaatggatgaagaactaaatccaaagatgctagctttgcataatgctcag
agaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattgggtcttta
ttccagcagacaggtgaccgtggaggaaatgcatcacttgcttggaaacgtgtaaaggga
tgcaaaacaaatggtcgtaatggagtggagcaaaagacaatcattctgttatcaactgac
atagcaagtaaacttctagggcagtcgatggatgaaagtggactaccccaactcacgagt
tacgattgcgaagtaaatgctcccatacaaggcaacagaaacctgctacagggtgaagaa
ctgctcagagctctggatcaagttaactga
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