Phaethon lepturus (White-tailed tropicbird): 104627084
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Entry
104627084 CDS
T08325
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104627084 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plet01009
]
104627084 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plet04515
]
104627084 (PCDH20)
Protein phosphatases and associated proteins [BR:
plet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104627084 (PCDH20)
Cell adhesion molecules [BR:
plet04515
]
Cadherins
Protocadherins
104627084 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
DC_STAMP
ORF45
He_PIG
Motif
Other DBs
NCBI-GeneID:
104627084
NCBI-ProteinID:
XP_010293488
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MHWAGGWLPPTSPPSLTPTPPHTPVPLSLPQHLLLFLLFVGPFNCFASYSRATELFYSLN
EGLPAGVLIGSLARDLRLPTAGGQRLVAPQPPLSFTLASHGLGGQYVQLDNRSGELHTSA
VEIDREALCVESSGATVSGGAAAVSSSSPSSESCLLLLDVLVLPQEYFRLVKVKIAIQDV
NDNAPHFPVPHIHLSVPENAPVNTRLAIEHPALDPDVGTNGVQTYRLRDNYGVFTLDVEE
NESGERTPYLIVMGALDRETRGEYVTVIIAEDGGTPPLMGSATLTVGISDINDNCPQFSD
SQLNVTLYGNSSLGTHVATVHAVDMDLGSNAQITYSYSQKVPQPSRDLFHLDESTGAIML
SSKVDGDTPRLHRLIILGNGPGCIPAVITVLVTIIKVMLRPPEVIPRFIANEAEGVVYLK
ELEPINTPIAFFTIKDPDEKYKVNCYLDSDGPFRLSPYKPYNNEYLLETTKPLDYETQQM
YEISVVAWNSEGFNVNKIIKVQVLDDNDNSPVFSQQLIELSIEENNVPNAFLTKLHATDA
DSGERGQVSYFLGPDAPSYFSLDKTTGVLTVSTQLDREEKEKYRYTVKAVDSGFPPRESI
ATVSITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVLNGS
DIFVIDTGKGVLRAKVSLDREQQSSYVLWIEAVDGGDPALSSTAKITILLLDINDNPPLV
LFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTG
NITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPD
ISIEEKQPQISIEPTHKKMESASCMPTLVALSIISLCSIALVTGMGIYICLRKGKKHHRA
DENLEVQIPLNGRINLHMLEKKPMEISNI
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcattgggcaggggggtggctgccacctacctcccctccttctctaacaccaacccct
ccccacacccctgtgcctctctctctcccccagcacttgctcctcttcctgctcttcgtt
ggacctttcaactgctttgccagttacagccgtgccactgagctcttctacagcctcaac
gaggggctgcctgctggggtgctcattggcagcctggcccgtgacctgcggctgcctacg
gctggtgggcagcgtcttgtggctccccaacccccactctccttcaccctggcctcccat
ggcttggggggccagtatgtgcagctggacaaccgctccggggagctgcacacctcggcc
gtggagatagaccgggaagctctgtgtgtggagagcagtggggccaccgtctctggggga
gcagctgctgtctcttcctcctccccttcatctgagtcatgcctgctgctgctggatgtg
ctggtgctgccgcaggagtacttccgcctggtgaaggtaaaaattgctatccaggatgtt
aatgacaatgcgccccacttccctgtgccccacatccacctctcggtgcccgagaacgca
cctgtgaacacccgccttgctatcgagcaccccgcccttgaccctgatgtgggcaccaac
ggtgtccagacctaccgcctgcgagataactatggtgtcttcaccctggatgtggaggag
aatgagagtggggagaggactccctacctgattgtaatgggggctctggacagggagaca
cggggggagtatgtcacagtcatcattgctgaggatggagggactcctccactcatgggc
agtgccaccctcactgttggcatcagcgacatcaatgacaactgcccccagttcagcgac
tcacagctcaacgtcaccctttatgggaattccagtctagggacgcatgtggccactgta
cacgcagtagacatggatcttggatccaatgcccaaatcacctactcctacagccagaag
gtcccccagccatccagggacttgttccatctggatgaaagcacaggagccatcatgctc
tccagtaaagttgatggggacactccaaggctccataggctgatcatactgggcaatggc
ccaggttgtatccctgccgtgatcacagtgctagtgaccatcatcaaagtcatgctgagg
ccacctgaagttatccctcgtttcatagctaatgaagcagaaggggtggtgtacttaaag
gaattggagcctatcaacacaccgatagcattttttaccatcaaagaccctgatgaaaaa
tacaaagtcaattgctatttggatagcgatgggcctttcagactttcaccatacaagcca
tacaacaatgaatacctgctagagaccacaaagcctttggactatgagacacagcagatg
tatgaaatctctgtagttgcatggaactcggaaggatttaatgtcaacaaaataatcaaa
gtacaggttctggatgacaatgacaactcaccagttttctctcaacagctgatagaatta
tccattgaggagaacaatgttcccaatgctttcttgaccaaactgcatgcaacagatgct
gacagtggagaaagagggcaagtgtcctattttttagggcctgatgccccttcctatttt
tctttagataaaaccacaggagttcttacagtttccactcaactggacagagaagaaaaa
gagaaatacagatacactgtcaaagcagtagattctgggttccctccaagagaatcaata
gcaactgtcagcatcactgtattggataaaaatgataatagtccaagatttatcaataag
gatttcagcttttttgtgccagaaaactttccaggttttggtgaaattggagttataagt
gtcacagatgctgatgcagggcaaaatggatgggttgccctttcagttctgaatggaagt
gatatttttgtcatagatactggaaaaggagttttgagagctaaagtctccctggacagg
gagcagcaaagctcctacgttctgtggattgaagcagttgatggtggtgatcctgccctg
tcctctactgcaaaaataactatccttcttctggacataaatgacaacccccctttggtc
ttgtttcctcagtctaatatgtcttatttgttggtccttccttctacccttcctggctct
cccatcactgaggtctatgctgtggataaggacactggcatgaatgcagtcatagcttac
agcatcataggaagaagaggccctcgaccggaatcgtttaggattgaccctaaaaccggt
aatatcaccttggaagagtcactgatgcaaaatgactatggcctctatcggctgcttgta
aaagttagtgatcacggctatccagaacctctccattccactgtcatggtgaaccttttt
gtcaatgacactgttagcaatgagagctacattgaaagtttgttaaggaaggagcctgac
atcagtatagaagaaaagcagccacaaatatccatagagcctacgcataaaaaaatggag
tcagcatcctgcatgcctaccttggtagctctgtcaataataagcttgtgttcaattgct
ttagtaacagggatgggcatttacatctgtctaagaaaagggaaaaagcatcacagagca
gatgaaaacttggaagtacaaatcccattaaatggaagaattaacctgcacatgttggag
aagaaaccaatggagatttctaacatttga
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integrated database retrieval system
