Phaethon lepturus (White-tailed tropicbird): 104627293
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Entry
104627293 CDS
T08325
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104627293 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104627293 (SMG5)
03032 DNA replication proteins [BR:
plet03032
]
104627293 (SMG5)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104627293 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
104627293 (SMG5)
DNA replication proteins [BR:
plet03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104627293 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
104627293
NCBI-ProteinID:
XP_010293744
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
TTCYSETFLAVLPCRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKLRELCVKLMFLH
PVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSHSTLECAYRTHLVAGIGFYQHLLLYIQ
SHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAG
VDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAYG
NLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLLQPKSSSLDSELT
SLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMVIICLMSVHSLK
RAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEGENPVPAFQSDGTDDQEPQELLNSIE
KEAEVDLANHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQGSI
KGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEGGSGRGKSRPKEA
LKNCVDGNGLGDSKSPSISKIEALDPAVNGPASLSTNDASIASNLQAMSTQLFQTKRCFR
LAPTFSNILLKPNSEPPILKDGLESKPCVNGDLEKPSLAEQDDVSDSEESISSNKSFRNE
RSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADL
QESGLALCNEVKDILGGAELPDLKANLLLPEDVALRNLPPLKNAHKRFNFEQDRPIFSAV
EESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQAQAQFHMAAEEA
RRNRLMRDMAQLRLQ
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
acaacctgctattctgaaacttttcttgctgtgttaccttgcagagcagtggtagaggcc
gttcatcggttggatctcatccttggtaataaggcagcgtatcaagaagtgttcaagccg
gagaacatcagcttgaggaataagctgcgggagctgtgtgtgaaactgatgttcttgcat
ccagtggattatggaagaaaagcagaagaactgctctggagaaaagtttactatgaagtt
atccagctcattaaaacaaataaaaagcacattcacagccatagcactctggagtgtgcg
taccggacccacttagttgctggcataggattttaccagcaccttctcctctacattcag
tctcactatcagctggagctgcagtgctgtattgactggacgcatgtaacggaccctcta
ataggctgcaagaaacccgtgtctgcatcagagaaggagatggagtgggcacagatggca
tgtcacagatgtctggtttatctgggagatctagctcgctatcagaatgaactggcaggt
gtggacacagagttgctggctgagcggttttactatcaagccctttctgttgcaccacaa
attggcatgccctttaaccagctggggacgttggcagggagcaaatactacaatgtggaa
gctacctattgctacttacgctgtatccagtctgaagtgtcctttgaaggtgcctacggg
aacctgaagcggctgtatgacaaagcagccaaaatgtatcaccagttgaagaaatgtgaa
accaggaagttgtctccaagcaagaaacgaggcaaagacattaagaggttgctggtgagc
tttatgtacctgcagagtcttttgcagccaaagagcagctctctggattctgagctgaca
tctctctgccagtctgtgctggaggatttcaacctgtgcttgttctacctgccttctcct
cctaatctgagctcaactagtgaagatgaagaagagtatgagagtggctactccttcctt
cctgatctcctgatctttcgcatggtgatcatctgccttatgagtgttcacagcctcaag
agggcaggttcaaagcagtacagtgcagccatcgctttcacgctggccctcttctctcac
ctgataaatcacgtcaatattcgcctgcaggcagagctagaaggggaaaatccagtccca
gcctttcagagtgatggtacagatgaccaggagccgcaggagctattgaactcgattgag
aaggaggctgaagttgacttggccaatcatcagcccagtgaggaacaacggaagaatgac
tgcaaaaaaagcaagaaatactcccgcctctcctgtttgcgtcgccgccgccacccccag
aaggtggatgagagtgacctgagtgagggctttgactctgactccagccagggctccata
aagggcagtgatggctcagaaagtggctcagagaagagtgacgaggaagcagaagctgct
tttgatgtggagacagactctgacatgaacagccaagaatctcggtccgacttggaggac
atggaggatgagccgggtgaggggggaagtggtcgaggcaaaagcaggcccaaagaggcc
ttaaaaaactgtgtggatggcaatgggctaggggactccaagagcccaagcatctctaaa
atagaggctctggatccagcagtcaatgggccggcttccctgagcactaatgatgcaagc
atagccagtaatctccaggccatgtccacccagttgtttcagaccaaacgctgctttcgc
ttggctcccacgttcagcaacatccttctgaaaccgaacagtgaaccacctatcttgaag
gatggactagaaagcaagccatgtgtcaatggagatctggagaagcccagcttggcagag
caagatgatgtgtctgactccgaagaaagcatttcaagtaacaaatccttcaggaacgag
cgatcccttcaggagaagctagagatcgtgaccaacgaagggctgcttctcactgtcaag
gtgttcctggactggctgaggacaaacacggacctcatcatcatgtgtgctcagagctct
cagagcctgtggaacaggctgtctgtgctcctgaaccttctgccttctgctgcagacctg
caggagtcagggctggccctgtgtaatgaagtcaaggacattctgggtggtgctgagctc
ccagacctgaaagccaacttgctgctcccagaagatgtggccctgcgaaatcttccccct
ctgaaaaatgcacacaagaggtttaactttgagcaggaccggcccattttctcagcagtt
gaggagtctgttgttcggatttgctgcattcggagctttggccacttcatcacccacttg
caaggcagcatcctgcagttcaactcggagcttgggatcttcatcagcatagcacagtca
gagcaagacaacttgctgcaccaggcccaagcccagtttcacatggctgcagaggaagct
cgtcggaacaggctaatgagagatatggctcagcttcgactgcag
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