Phaethon lepturus (White-tailed tropicbird): 104627650
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Entry
104627650 CDS
T08325
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104627650 (VPS53)
Membrane trafficking [BR:
plet04131
]
Protein recycling
Others
EARP complex
104627650 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
104627650 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
Laminin_II
GrpE
TPR_CAND1
Syndetin_C
hAT-like_RNase-H
NBD94
COG3_N
COG5_N
MCPsignal
Med11
ERM_helical
Tropomyosin
Seryl_tRNA_N
Snf7
Motif
Other DBs
NCBI-GeneID:
104627650
NCBI-ProteinID:
XP_010294279
UniProt:
A0A091T6J2
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
VFPSQDPLDRADFNAVEYINTLFPTEQSLANIDEVVNKIRLKIRRLDDNIRTVVRGQTNV
GQDGRQALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSITTL
NHLHMLAGGVDSLEAMTRRRQYGEVANLLQGVVNVLEHFNKYMGIPQIRQLSERVKAVQN
ELGQQILADFEEAFPSQGTKRPGGPSNVLRDACLVANVLDPRIKQEIIKKFIKQHLSEYL
VLFQENQDVAWLDKIDRRYAWIKRQLVDYEEKYGRMFPQEWCMTERIAVEFCHVTRTELA
KIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKRFSGCTLADGTVKKPEVPPPSTNPFLEDE
TGTETDEIVIEKSDTDKPKKPKVPDNPFHGIVSKCFEPHLYVYIESQDKNLGELIDRFVA
DFKAQGPPKPNVDEGGAVLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYA
WKILSGNLPKTTSSSGGLTITSLLKEKEGSEVAKFTLEELCLICSILSTAEYCLATTQQL
EEKLKEKVDASLVERINLTGEMDTFSIVISNSIQLLVQDLDAACDPALTAMSKMQWQNVE
HVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFINHLFKCKPIS
MVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEP
PVVFVDNYIKLLADCSTDTFQKILDMKGLKRSEQSSMLDLFRQRLPAPPSGVENTGSLSL
NAPTPEQESSRIRKLEKLIKKRL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtatttcccagccaagatccactggacagagcggacttcaatgctgtggagtatattaat
actctctttcccactgagcagtctttggcaaacattgatgaagttgtgaacaaaatcaga
ttgaaaataaggaggttggatgacaacattcgaactgtagtgagaggacagaccaacgtg
ggacaggatggcaggcaggccctagaagaagcccagaaagccattcaacagctctttggt
aaaattaaggatattaaagacaaggctgaaaaatctgaacaaatggttaaagaaatcaca
cgggatatcaagcagctagatcatgccaagcgtcatctgaccacctccatcaccaccctc
aatcacctgcacatgctggcggggggtgtggattcactggaggctatgaccagacggaga
caatatggggaagttgccaaccttctccaaggtgtcgtgaatgtgttggagcacttcaac
aaatacatggggattcctcagattcgacagctttctgaaagggtgaaggcagtgcagaat
gagttgggacagcagatcctggctgacttcgaggaagcctttccttctcaaggtacaaag
aggcctggtggacccagcaatgtcctacgtgatgcgtgtctagtcgccaatgtcctggat
cccagaatcaaacaggaaatcatcaagaaatttattaaacaacacctctcagagtatctg
gtccttttccaggaaaaccaagatgtggcctggctggataagattgacaggcgctatgcc
tggataaagcgtcagctggtggactacgaggagaagtacgggcgcatgttcccccaggag
tggtgcatgacggagcgcatcgctgtggagttctgtcatgtcacaaggacagagcttgct
aagataatgcgcacaagagcaaaggagattgaggtgaaattgcttttgtttgcaattcag
aggacaaccaactttgaaggactcttggctaaacgtttctcaggttgcactctagctgat
gggacagtgaagaaaccagaagtgccacctccctccaccaatccatttctggaagatgaa
actgggacagagacagatgagattgtgatcgagaaaagtgatacggacaaaccaaagaag
ccaaaggtccctgacaatccttttcacggcatcgtttccaagtgctttgagcctcacctc
tatgtgtatatcgagtcccaggacaaaaatctcggcgaactgattgacaggtttgtggct
gacttcaaggctcaaggtccccccaagcccaacgtggatgaaggaggagccgtcctgccc
agctgtgctgacctctttgtgtactacaagaagtgcatggtgcagtgctcccagctcagc
acaggcgagccgatgatagccctgaccaccatattccagaagtaccttcgggaatacgcc
tggaaaattctgtctggaaacctgcccaagacaactagcagcagcggtgggctcaccatc
actagtttgctgaaagaaaaggaaggctctgaagtggctaagtttactttagaagaactc
tgcctcatttgcagcatccttagtactgcagagtactgcttggcaaccacccagcagttg
gaagagaaactcaaagaaaaagtggatgcaagtctagtggagagaatcaacctgacagga
gagatggacactttcagcattgtgatctccaacagcatacagctgttagtgcaggacctg
gatgcagcctgtgaccctgccctgactgctatgagcaagatgcaatggcagaacgtggaa
cacgttggtgaccagagtccttatgtcacctcagtgattctccacattaaacagaacgtc
cccatcatccgcgacaatctggcctccacaagaaagtatttcactcagttctgtataaaa
tttgcaaactccttcattcccaagttcattaaccatctcttcaagtgcaaacctattagc
atggtgggcgcagaacagctgctgctggacactcactctctgaagatggttctcctggat
ctgccctccattgggtcccaagtggtgaggaaggctcctgccagctacacaaagatagtg
gtgaaaggcatgactcgagctgaaatgatcctgaaggtggttatggcaccacatgagccc
ccagttgtttttgttgacaattatatcaagctccttgctgactgcagcactgacactttc
cagaagatactggacatgaagggcctgaagaggagcgagcaaagcagcatgctggacctc
ttccgccagcgcctcccggctcccccctctggggtggagaacaccggctccctctcgctg
aatgctcctacgcctgagcaggagtcctctcggatacggaaactggagaaactcatcaaa
aaaagactctaa
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