Phaethon lepturus (White-tailed tropicbird): 104627670
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Entry
104627670 CDS
T08325
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104627670 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plet03041
]
104627670 (DHX8)
Enzymes [BR:
plet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104627670 (DHX8)
Spliceosome [BR:
plet03041
]
Complex C
Other components
Step II factors
104627670 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
PhoH
PRP38_assoc
TsaE
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104627670
NCBI-ProteinID:
XP_010294304
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MADLAALEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAVLLK
NGAEFTDSLISNLLRLIQTMRPPPKPSTSKETAVKPKSEKEKLKELFPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADRQGKQRNSDHRAKKKRKSRSRSRDRKRRHRSRSWT
RDKNRGKSRYRSRSRSQSPSRDRKDREKYVEKSNERWRDKHIDRPPPEEPSIGDIYNGKV
TSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTS
LSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLERKRLT
RISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGH
TKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDP
LPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKE
QLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSE
EFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTI
HTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEP
ETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV
YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID
QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL
KAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKM
LIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW
KNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFF
RNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRW
LVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctggcggctctggaggagctcgcgaagctcgaatacttgtcgctagtctcc
aaggtctgcaccgagctggacaaccacctgggcatcaacgacaaggacctggctgagttt
gtgataagtcttgctgagaaaaatactacatttgatacatttaaagcagttcttctaaag
aatggtgctgagttcacagattcccttattagtaatttgctacgtctcatacagacaatg
cggcctccaccaaaaccatctacgagtaaagagacagctgtcaaacccaaatcagagaag
gaaaagttgaaggaattgtttcccgcactttgcaggccagacaatcccaacatcaggaat
atgctggatgaagatgatgtgaaagtggcagctgatgcacttaaagaactagaagctctg
atgcctagtgcagacaggcaaggcaagcaaaggaacagtgaccaccgggcaaagaaaaag
aggaagagccgaagtcgtagcagggacaggaaacgaaggcacaggtctcgttcttggact
cgggataagaacaggggaaaatccagataccggtcaaggagcagaagtcagagtcccagc
agggaccgtaaggatcgagagaagtatgttgagaagagcaatgagagatggagagacaag
cacatagaccggccaccacctgaagagccttccattggcgacatttacaatggcaaagtc
acgagtataatgcaatttggatgctttgtgcagctagaaggactaaggaagcgttgggag
ggcttggtccatatctcagagcttcgaagagaaggacgggttgcaaatgttgctgatgtt
gtgagcaaaggacaaagagtaaaagtcaaagtgttatccttcactggatctaaaaccagc
ctgagcatgaaggatgttgatcaagacactggggaagacttgaacccaaaccggaggaga
aacctggttggagaaaccaatgaagaaacgtctatgagaaacccagacagacccagtcac
ctgtccctggtgaatgccccggaggtggaggatgatagccttgaacggaaacgcctcacc
cgaatttcagacccagagaaatgggaaataaaacagatgattgcagctaatgtgctttcc
aaggaagagtttccagacttcgatgaggagactggaattcttcctaaagttgatgatgaa
gaagatgaggaccttgagattgagttagttgaagaagagccaccattccttcgaggccat
actaaacagagcatggatatgagtcccatcaaaatagtaaagaatccagatggttccttg
tcccaggctgcgatgatgcagagtgctttagctaaagaaagacgagaacttaagcaagcc
cagagagaagcagagatggattctatccccatgggactcaacacacactgggtggatccc
ctccctgatgtggatggaagacaaatagctgcaaacatgcgaggtattgggatgatgccc
aatgatatcccagagtggaagaaacatgcatttggtggcaataaagcttcttatggtaag
aagacccagctttccattattgagcagagagagagtctcccaatcttcagactgaaggag
cagctgatacaagctgtgcatgacaaccagattctgattgttattggagagacaggatct
gggaaaacaacacagattacccaatacctggctgaggcagggtatacatcaagaggaaag
attggatgcactcagcctcgcagagtggctgcaatgtctgtcgcaaagagggtgtcagag
gaatttggttgctgcctgggacaagaggttggctacaccattagatttgaagactgcact
agccctgaaactgttatcaaatacatgacagatggtatgttactgagggagtgcttgata
gatcctgatctgacccagtatgccattatcatgctggatgaagcccatgagaggaccata
cataccgatgtgctctttggactcctgaagaagacagtgcagaaacgacaggatatgaaa
ttgatagtgacgtcagcaacgctggatgctgtgaaattctctcagtatttctacgaagca
ccaatcttcacgattcctggcagaacatacccagtagaaattctgtacacaaaagagcca
gagacagattatttggatgccagtctgattacagtaatgcagatccacttaacagagcca
ccaggtgacattctggtgtttctaactggtcaggaagagattgacactgcctgtgaaatc
ctctatgagaggatgaaatctctaggacctgatgttccagagttaattatcctaccagta
tattcggctttacccagtgaaatgcaaaccaggatttttgacccagctccaccaggaagc
agaaaggttgtcatcgccactaacattgctgagacgtctttgactattgatggaatatat
tatgtagtcgatcctggctttgtgaaacagaaagtttataactccaagactggaattgac
cagctggttgttacaccgatttcgcaggctcaagcaaagcagagagcaggaagggctgga
agaacaggaccaggaaagtgctataggttatatacagagcgtgcttatagagatgaaatg
ctaaccaccaatgtgcctgaaatccagagaacaaatttggccagtacagtactttccctg
aaggctatgggcatcaatgatttgctctcctttgactttatggatgctcccccgatggaa
actctcataactgccatggaacagctgtacaccttgggagctctggatgatgagggactg
cttactcgacttgggcgcaggatggcggaattccccttggagcctatgttgtgtaagatg
ttaatcatgtctgtacatctgggatgcagtgaggaaatgttgacaatagtctccatgctg
tctgtacagaatgtgttctacaggccaaaggataaacaagcacttgctgatcaaaagaaa
gccaagttccatcagacagaaggtgatcacctcactctgctggctgtgtacaattcctgg
aagaataataagttttcaaatccctggtgctatgaaaattttatccaggcccgatcctta
cgtagggcacaggacatccgcaagcagatgttgggcattatggacaggcacaagctggat
gtggtatcctgtgggaaggcaacagttcgagtccagaaggcaatctgtagtggcttcttc
cgaaatgcagcgaagaaggatccccaggaaggttatagaacacttattgatcaacaggta
gtctatatccacccatccagtgctctcttcaacaggcagccagaatgggtggtctatcat
gaactggtgctgaccaccaaagaatatatgcgtgaagtgacgactattgatcctcgctgg
ctggtggaatttgcaccagctttcttcaaggtttctgatccaaccaagctgagcaaacag
aaaaagcagcagcggctggaaccgctgtacaatcgctatgaggagcccaatgcttggagg
atatctcgtgcattcagacggcgctga
DBGET
integrated database retrieval system
