Phaethon lepturus (White-tailed tropicbird): 104627911
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Entry
104627911 CDS
T08325
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03020
RNA polymerase
plet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104627911 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
104627911 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plet03021
]
104627911 (POLR2B)
03400 DNA repair and recombination proteins [BR:
plet03400
]
104627911 (POLR2B)
Enzymes [BR:
plet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104627911 (POLR2B)
Transcription machinery [BR:
plet03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104627911 (POLR2B)
DNA repair and recombination proteins [BR:
plet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104627911 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
104627911
NCBI-ProteinID:
XP_010294618
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTG
YNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDK
LDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQV
MVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIII
NPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEV
LYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFG
EMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQIS
LVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatgaagacgatgatgaaatcacccccgacttgtggcaagaagcttgttgg
atcgttattagctcctattttgacgaaaaggggttagtcaggcaacagttggattctttt
gatgagtttattcagatgtctgtgcagagaattgttgaagatgctccaccaattgactta
caagcagaagcccagcatgccacgggagaagtggaagagccgccccggtatctgctgaag
tttgaacaaatctatctctccaaacctacacattgggaaagagatggagcaccctcacct
atgatgcccaatgaagccagactgagaaaccttacgtattcagcccccttgtatgtggat
ataactaaaacagttattaaagaaggggaggatcagttacagacacagcatcagaaaact
tttataggaaaaattcctattatgttacgttcaacgtactgtttgttgaatggcttaact
gaccgtgatctttgtgaactgaacgaatgcccgcttgatcctggtggctactttatcatt
aatggatcagaaaaggttctgattgctcaagagaaaatggctacaaacacagtgtatgtg
tttgcaaagaaagattcaaagtatgcctacacaggagagtgtaggtcttgcctggaaaat
tcctctcgaccaacaagtactatatgggttagcatgctggccagaggtgggcagggtgcg
aagaagagtgctattggtcagcgcattgtagcaactttgccatatatcaaacaagaagtc
cccatcataattgtctttcgtgcactaggctttgtgtccgacagggacattttggagcac
atcatatatgattttgaagatccagaaatgatggaaatggtcaaaccttcgctggatgaa
gcatttgtcattcaggagcaaaatgttgctctaaacttcattggatcaagaggtgcaaaa
ccaggtgtcaccaaagaaaagagaatcaagtatgctaaagaagtcttgcagaaggaaatg
ctcccgcatgttggtgtcagtgacttctgtgaaaccaaaaaggcctattttctagggtat
atggttcatagattgttgctggcagcactgggaagaagagagcttgatgaccgagatcat
tatggcaacaaaagactggatcttgctgggccactgttagctttcctgttccgaggaatg
tttaagaatttgctaaaggaagtaagaatatatgcgcaaaagtttattgacagagggaaa
gatttcaacttggaactggcaattaaaacaagaattatttcagacggtttgaagtattca
ttggcaactggaaactggggtgaccagaagaaagctcatcaggccagagcaggagtatct
caggtgttaaaccggctgacttttgcatctacgctttcccatctgagacgcctgaattct
ccaattggtagagatggtaaactagcaaaacccagacagctgcacaatacgttgtgggga
atggtttgccctgctgagaccccagagggtcatgcggtaggacttgtgaagaacttggcc
ctgatggcttacatttctgtggggtctcagccatccccaattttggaattcttggaagag
tggagtatggaaaacctggaagaaatctctccagcagcaatagccgatgctaccaagatc
tttgttaacggctgctgggtaggaatacacaaagatccagagcagctcatgaatacccta
aggaagctccgtcgtcagatggacatcattgtgtcagaggtctcaatgattagagatatt
cgcgagcgagaaatccgcatctatactgatgcaggcagaatttgtagaccccttttaatt
gtggaaaaacagaagttgctattgaagaaaaggcatattgaccaactgaaggaacgagag
tataacaattacagttggcaggatctcgtggccagtggtgtagtagagtacattgataca
ctggaagaagagactgtgatgctggcaatgactccagatgacttgcaagagaaaggtgtg
gcatattgttcaacatacacacactgtgagattcacccatctatgatcctgggagtatgt
gcatctattatccctttccctgatcacaaccagtctcccaggaacacataccagtctgct
atgggtaaacaggctatgggagtttacattacaaactttcacgttcgtatggatacactg
gcacatgtgttgtattatcctcagaagccccttgtaacaacacgctccatggagtacttg
cgatttagagaattaccagcaggtatcaactcaattgtagccattgcatcatacacaggc
tataaccaggaagactctgtcatcatgaaccgttctgctgttgacagaggctttttcaga
tctgtgttctatcgctcatacaaagagcaagagtctaaaaaagggtatgaccaagaggaa
gtttttgaaaagcctacacgtgaaacttgccaaggtatgagacatgcaatctatgacaaa
cttgatgatgatggtttgatagcacctggggtacgtgtgtctggggatgatgttatcatt
ggcaaaacagtaacgctgccagaaaatgaagacgaactggaaagcactaacagacgtttc
acaaagagagactgtagcacttttctgcgaactagtgagactggtattgtagatcaggtc
atggtaacccttaaccaggaaggatacaagttctgcaagattagggtacgctctgtaaga
atcccacaaattggagataaatttgccagcagacatggtcagaaaggaacctgtggtatc
cagtacaggcaagaggatatgcccttcacctgtgaaggcatcacacctgatataattatc
aacccccatgccatcccctcccgcatgaccattggtcacttgattgagtgtcttcagggg
aaggtgtctgcaaacaagggagaaatcggtgatgctacaccttttaatgatgctgttaat
gtgcagaagatttccaatcttttatcagattatggctatcatctaagaggaaatgaggtc
ctctacaatggcttcactggtcgaaaaatcacatcgcaaatcttcattggtcctacatat
tatcagcggttgaagcacatggtagatgacaaaatccattctcgtgcaagagggccaatc
cagatacttaatagacagcccatggaaggcagatctcgtgatggtggccttcgttttgga
gaaatggaacgagactgtcagattgctcatggagcagcccagttcttgagagaaagattg
tttgaagcttcagacccatatcaagtccatgtttgtaacctctgtggaatcatggcgatt
gcaaacacaaggactcacacctacgaatgccggggatgccgtaataaaactcagatatct
ttggttcgaatgccctatgcctgcaaactcctcttccaagaactgatgtctatgagtatt
gcacctcgtatgatgagtgtttag
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integrated database retrieval system
