KEGG   Phaethon lepturus (White-tailed tropicbird): 104628181
Entry
104628181         CDS       T08325                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
plet  Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04382  Cornified envelope formation
plet04510  Focal adhesion
plet04512  ECM-receptor interaction
plet04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:plet00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104628181 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104628181 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104628181 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104628181 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plet04147]
    104628181 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:plet00536]
    104628181 (COL4A5)
Exosome [BR:plet04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104628181 (COL4A5)
Glycosaminoglycan binding proteins [BR:plet00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104628181 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104628181
NCBI-ProteinID: XP_010294987
LinkDB
Position
Unknown
AA seq 1668 aa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NT seq 5007 nt   +upstreamnt  +downstreamnt
atgtcttcaaaggcttgccacggatgtacatctttatccaaatgtgattgcagtggagta
aaaggtgaaaagggtgaaaggggattcccaggcttggaaggacagccaggtttgcctgga
tttccgggaccagaaggaccacctggtccaagaggcttgaagggtgatgatggacttcca
gggcctattggacccaaaggaatcagaggaccgccagggcttccaggatttccaggaaca
ccaggacttcctggattaccaggacaagatgggccaccaggacctcagggtattccagga
tgcaatggaacaaagggagaacgtggattcccaggcagtccaggttttcctgggttacaa
gggcctcctggaccccctggtctgccaggtatgaagggtgaagcaggtgaaataattaca
tccttgctgccgggacagaagggcgacccaggatttccaggtcttccagggatacctggc
ccacccggctccatgggaatacctggtcctgttggccctccaggccccccaggtttgaca
ggacctcctggtccacctgggctgccaggacctaagggtaatatgggtttgaatttccaa
ggacccaaaggtgaaaaaggtgaacaaggtcttcagggacctccagggccaccagggcaa
attggagaacagaagaggccaaatgacattgagtttcagaaaggagatcagggtattcca
ggtgatccaggcccaccaggacttcctgggccacaaggccctcctggtcttcccggtggc
gtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaaagaggaaagcctggcaaagat
ggagaagctggtcagcccggtagggatggtttacctggtggtcctggaataaatggtgct
ccaggaagagagggtgaaaagggtgaaaaaggtgacattggtccccctggtcctcctggc
attgtcgtttcaagaccaggcattgatgcagtagtgggaccaaaaggtagcaaaggattg
ccaggacttccaggagccaaaggggagcgtggattctctggcaggccgggcccacctggg
ttgccaggttctccagggatcactactgttggaccccctggcccacctggcttacctggt
gagagaggacagaagggagatccaggtttacccggtgtctctattcctgggcaaccagga
cttgatggaccacgaggacctccaggaccaccaggtcccccagggccacctgcaccatct
gttcctcctggtgaagggatatgtgagcaggggccgccaggtcctccaggaattccagga
caacaaggctttacaggggagcgaggccaaaaaggtgatcaaggagacacatgcttcaat
tgtataggaactggaataactgggcctcctggggagagaggaccaccaggacctccaggt
agtccaggttctcctggttttcctggaccaaaaggtgaaaaggggcttcctggattaact
ggccttgtagggccaccaggattcccaggatccccaggtgctcctgggcgacctggtcct
aaaggagacccaggggatgtcctgacttctccaagaatgaaaggtgacaaaggagaccct
ggcttcccaggacctccaggtctccctggcatagatggcacccctggacgagatggactg
ccaggtctacctggccctaagggggaacctggcagtgttgcattcaaaggagaaatgggt
attccaggtgatccaggaataccaggtcttcctggagacaaaggtcttcctggacctcct
ggttttggtccacaaggttcacctggtgaaaagggcatccaaggtgtatcaggccgtcca
gggcctcctggagttcctggtccaaaaggtgatcctggccagactattacagaaccagga
gttcctggcccccctggtcctccaggaagaaatggtgacccaggtcttccaggagatcct
ggtcagccaggtcagcgtggcttatcaggcatcccaggtgcaaagggagagccaggtatt
cctggcattggacttccaggtccacctggcccaaaaggtttcccagggactccaggcccc
cccggagctccgggaactccaggtcgccctggtcttgatggacctcctggaccacctggt
ttcccaggacagaagggggatcgtggttttggagttccaggaccacctggacccccagga
ccaccaggcacaaaaggagttcaaggacctaaaggtgatcctggcttcccaggaaaccct
ggtctcccaggacgggcaggttttgatggaactccagggcccaaaggtgaccctggacca
agtggaccaccaggactcccaggaccaccaggtatccctggcattggtggtcaaggtcca
cctggatctccaggacctccaggacctgttggccccccagggttgcagggcattccaggg
gagaaaggggatccaggtcctccaggcttcgacgttcctggtcctccaggtgaccaagga
accccaggatatccaggacctcctggtctcccagggcctcagggttcacctggaccacct
ggccgggatggaatacctggatttccaggtgccaaaggtgagatgggcgtcatgggagct
cctggtcctccagggcctccaggaactcctggaagaaatggcctgcctggtttgaaaggt
aatagtggattacctggtccgccagggcctcctggactggtaggacagaaaggcatcaaa
ggtgaagcaggcctgccaggtccacctggaaaagttgatccaaaacaactaggagcaaaa
ggagaaaaaggggagccaggtgttccaggtattcctggtttatcgggacagaaaggttat
caaggtctcccaggcgacccaggcccaccaggacttagtggcccaccaggtgtgccagga
ttgccaggcatcaagggagacacggggcttccggggcagccaggaccaacaggacctcca
gggttaaaaggtgccatgggagagatgggtcttccaggtcccccagggattaaaggcagc
caaggaatagcaggacgtccagggcagcctgggcctgcaggatttcctggactgaaaggg
gagaaaggtgaccccggtcttccaagcattggtattcctggtctccctggaccaaagggt
gacctcggtttgcctggatacccaggtagtccaggcagtaaaggtatagctggaaatcct
ggtttgcccggatttccaggcagtccaggtgcaaaaggagaaccaggccttcctggattc
ccaggaacgccaggaattccagggccaaaaggtatcgagggacctccaggtaatcctggc
ctgcctggaccacctgggccagtaggtgatattggtcgtcctggccctcctggtccttca
ggggagaagggacagcctggtcgagacggtatccctggaccagctggtcagaagggtgaa
ccaggtctaccaggttttggacgcccaggacctccaggactcccaggattgtcagggcaa
aaaggagaactggggttacctggcccaccggggccccctggacttccaggtctgaaggga
gaaccaggtttccagggattccctggtctacagggtccaccaggtccaccaggattacca
gggccacctctggaaggtcctaaaggtagccctggcccaccaggtgttccaggaaggcca
ggtccctcaggtcctccaggtccaccaggcccagaaggtccacgagggccaccaggcaat
ggaggacttaaaggggaaaaagggaacccaggtcaacctggcccacctggcctcactggt
caaaagggagatcaaggaccacctggacgtcagggggatcctggtcgtccaggtctgaac
ggaatgaagggtgaccccggggttccaggcgttccaggattcccaggtatgaagggtccc
actggacctgcaggacccgctggcctcacgggcagtcaaggactgccaggcccaccaggt
ccaccaggtttaccaggtaccatcggacgaagcattgttgtcaaaggtgaccctggtccc
ccgggttctccaggacagcctgggttgaaagggccacctggattaccggggccacaggga
ttgccaggtccaattggtcatcctggtgacccagggcgagatggactacctggttttgat
ggtccagcaggacgtaaaggagagagaggtcttccaggccaaccaggttcacgaggaata
cagggacctcctggtcctgatggcttacaaggcccacccggtcctcctggaacagcttct
gttgctcacggattccttataactcggcacagccagaccagggatacaccgctatgtcca
caaggaacgtcaagaatatatgacggattctctcttctatatgtgcaaggaaatgagaga
gcacatggccaggatttaggtactgctgggagctgtcttagacgtttcagcaccatgcct
ttcatgttctgcaacatcaacaatgtttgtaattttgcgtcaaggaatgactattcctac
tggctatcaaccccagagccaatgccgatgagcatggagccgctgactgggcaaagcatc
cagccattcattagccgatgcgttgtgtgtgaagctccggctatggtgatagctgtccac
agtcagaccattcagattccttcgtgtccttcaggctgggactccctttggattggttac
tctttcatgatgcacactagtgctggagcagagggctctggacaggccttggcatcgcct
ggatcctgtttagaggaattccgctcagctccgtttattgaatgccatggtcgtggcact
tgtaactactatgccaattcatatagtttctggctggcaactgttgaggtgtcagaaatg
ttcagtaaacctcagtcagagacactgaaagctggagacttgaggacgcgtattagtcgt
tgtcaagtttgcatgaagaagacgtaa

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