Phaethon lepturus (White-tailed tropicbird): 104628447
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Entry
104628447 CDS
T08325
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04140
Autophagy - animal
plet04148
Efferocytosis
plet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104628447 (VPS18)
04148 Efferocytosis
104628447 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104628447 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104628447 (VPS18)
Membrane trafficking [BR:
plet04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104628447 (VPS18)
Hops complex
104628447 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
104628447
NCBI-ProteinID:
XP_010295325
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
YVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGKDTLLRIDLGKPDEPNQVE
LGRKDEAKVYKMFLDHTGSHLLIALNTSECLYLNRSVQKVRALSRWKGHLIESVGWNKFL
GSETNTGPILVGTAQGQIYEAEISVSEGSLFSTNPDQYFRQVYTLEEESGPAPVCCLEIE
RGLEGKFFIIATTRKRLFQFVGKVPEGTEQQGFSSIFAMHADHLPSFREFPASFGFSEIA
FYTPKLRSNPRSFAWMMGNGVLYGTLDYSRPDSILSDERVWVYPSDIDITVNKPISIVLT
QFHFLLLLPDRVKAVCTLNGQVVFQDLFLEKFGLLTRMIKDPTVQQIWIHTEKVVFRYHV
QRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHCFQNKRYLDSAKCYALTQN
YFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTTWLTELYLNWLGILEGDPS
QRNLYLDTREKFRTFLSSPKNKDCLFNNRASIYELLASHGDTEHMVYFAVIMQDYERVVA
HHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDAWISMGSRLDARNLIPALV
NYSQSASTQQINEAIRYMEFCVYQLEETQQAIHNYLLSLYALCRPDSLLSYLEQAGTNPN
RIHYDLKYALRLCAEHGHHHACVHIYKVMELYEEAVDLALQVDVDLAKSCADLPEDDEEL
RKKLWLKIARHVVQEEKDVKKAMACLSSCALLKIEDVLPFFPDFVTIDHFKEAICNSLED
YNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSVEPQEKCAACDFPLLNRPFYLFLCG
HMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLAATSQPSKSHHRPKDADTISLGKGQQSRE
QIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYEEEMQSWL
NT seq
2834 nt
NT seq
+upstream
nt +downstream
nt
gatatgtgaatgcacgactagagaaggaaacaccaatatttaacaagcaaaggattgatt
ttgctcctccagagaaaattaacagcttagtggtctcctctaaccagctctgtatgagtc
ttggcaaagacacccttctcaggattgaccttgggaagccagatgaacctaatcaggtag
agctgggacgcaaagatgaagccaaagtctacaagatgtttttggaccacacaggctctc
atctcctgattgctctgaacaccagtgaatgcctttacctgaacagaagtgttcagaaag
tgcgagcactctcccgctggaaaggccacttgattgaaagtgtgggctggaacaaatttc
ttggttcagagaccaacactggacctatcttggtggggacagcccaggggcagatatatg
aggctgaaatttctgtcagtgagggaagcctcttcagcactaatcctgaccagtacttcc
gacaggtctacactctggaggaggaatcaggacctgccccagtctgctgcttggagattg
aacgagggttagaagggaaattttttattatagccaccactcgaaagaggctcttccagt
ttgttggcaaagtgcctgaagggacagagcagcaaggcttcagctccatatttgctatgc
atgctgaccatttacccagcttccgggagtttccggccagctttggtttcagtgagatag
ccttttacacgccaaaactgcgctccaacccacgctcctttgcctggatgatgggaaatg
gtgttttatatggtacgttggattacagccgtcctgattcaattttgagtgatgaacggg
tctgggtttatccttctgatattgacataactgtgaacaagccaatatccattgtactta
cccagttccacttcctgttgctgctgcctgatcgagtgaaggctgtatgcactctgaatg
ggcaggtcgtttttcaggatctgttcctggagaagtttggcttactgacacgcatgatca
aagatcccacagtccagcagatatggatccacactgagaaagtagtgttccgctaccacg
tccagcgggaatctagagatgtatggaagatgtatatgaatatgaacaaatttgatttag
ccaaagaatattgtaaagaccgtccagagtgcctagatattgtgctggcaaaagaggcag
agcactgcttccaaaacaagaggtatctagacagtgccaaatgttatgcgctgacccaga
actactttgaggaaattgcccttaagttcattgaagccaagcaagaagaggccctgatgg
agtttctgattaagaagctaagtaacctaaaaccttctgagaagacacagactactctgc
tgaccacgtggttaacggagctgtacctgaactggctaggcatattggaaggggatccct
cacagcgaaatctctatttggatacacgggagaagtttcgtactttcctgagcagtccta
aaaacaaagactgtctatttaataaccgggcatctatttatgagctattggcaagccatg
gggacacagagcacatggtctactttgcagtcatcatgcaggactacgagcgcgtagtag
ctcaccactgccagcatgatgagtatgatgaagctctaaatgtgctctccaggcacagag
acgagaagctgttctacaagttctctccagttctcatccagcatattcccaagaaggtag
ttgatgcttggatttctatgggctctagactggatgccaggaacctcattccagcccttg
ttaactatagccaaagtgccagcacccagcagatcaatgaagccattagatacatggagt
tctgtgtctatcagttggaagaaacacagcaagccattcacaactacctgttgtctcttt
atgctttgtgtcggccagactcgctgctatcttacctggagcaagcaggaaccaatccaa
acaggatccactatgacctgaagtatgcattgcgcctgtgtgcagagcatgggcaccacc
atgcatgtgtccatatttacaaagtgatggaattatatgaggaggctgtggatcttgcct
tacaggtggatgttgatctcgccaagtcctgtgcagatctccccgaagatgatgaggaac
tccggaagaagctgtggttgaagattgctcgtcatgttgttcaggaagagaaggatgtga
agaaggcaatggcctgcctctccagctgcgccctgctgaagattgaagatgtcctcccat
tctttccagactttgtcactattgatcatttcaaggaggcaatctgtaactccctggagg
actacaacaaacacattgaggagctgaaaagggagatggaggaagccacacagagtgcca
agagaatccgagaggacatccaggaaatgagaaataagtatggctctgtggagcctcagg
aaaaatgtgctgcttgtgactttccacttctaaatcgtcctttttaccttttcctgtgtg
gtcacatgttccactatgactgtctcctccaagccgttttcccaaaccttcctgcctata
agcaggcaaaacttgaagatcttcagaagaagctggcagctaccagtcagccttccaaga
gccaccatcgtcccaaggatgcagataccattagcttggggaaggggcagcagagccggg
aacagatcaaagctgacattgatgatattgtggcagctgaatgtgtgtactgtggtgagc
tgatgatccggtccattgacaagccttttattgatccccaaaagtatgaagaggagatgc
aaagctggctgtag
DBGET
integrated database retrieval system
