Phaethon lepturus (White-tailed tropicbird): 104628478
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Entry
104628478 CDS
T08325
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plet03021
]
104628478 (CHD1)
03036 Chromosome and associated proteins [BR:
plet03036
]
104628478 (CHD1)
Transcription machinery [BR:
plet03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104628478 (CHD1)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104628478 (CHD1)
SLIK complex
104628478 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
104628478
NCBI-ProteinID:
XP_010295386
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
QSDDDSGSASGSGSGSSCGSSSDGSSSQSGSSDSDSGSESGTQSESESDASRENKQIQAK
PPKVDESEFWKSSPSILAVQRSAVLKKQQQQQKAASSDSGSEEDPSSSEDSADDSSSETK
TKKHRDEDWQMSGSGSVSGTGSDSESEEDREKSSCEESESDYEPKNKVKSRKPPSRIKPK
SGKKNAGPKKRQLDSLEDEEEEEEEEEDDYDKRGSRRQATVNISYKEAEETKTDSDDLLE
VYGEDVPQTEEDEFETIEKFMDSRVGRKGATGAATTIYAVEADGDPNAGFEKSKEPGEIQ
YLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQ
QELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQARI
DEYFSRNQSKTTPFKDCKALKQRPRFVALKKQPSYIGGHETLELRDYQLNGLNWLAHSWC
KGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMN
AVVYLGDVTSRNMIRTHEWMHPQTRRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAH
RLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK
GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKAL
SKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLL
IRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSED
FCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGS
VEEDILERAKKKMVLDHLVIQRMDTTGKTILHTGSTPSSSTPFNKEELSAILKFGAEELF
KEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPE
RNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQVCLDSD
NT seq
3208 nt
NT seq
+upstream
nt +downstream
nt
ccaatcagatgacgattctgggtcagcatcaggttctggatctggttcaagctgtggaag
cagtagtgacggaagcagcagccaatcaggcagcagtgactctgactctggttcggagtc
aggcactcagtcagaatcagagtctgacgcatctagagagaataaacaaattcaagctaa
accgccaaaagttgatgaatctgagttttggaagtctagtccaagtatacttgctgtgca
aagatcagcagttcttaagaagcaacagcaacaacaaaaggcagcctcatcagacagtgg
ttcagaagaggacccatcaagtagcgaagattctgcagatgactcatccagtgaaaccaa
gacaaaaaaacatagagatgaagactggcaaatgtcaggatcagggtcagtatcgggaac
tggttctgattctgaatcagaggaagatagggagaagagcagttgtgaagaaagtgaatc
tgactatgagccaaaaaacaaggtcaaaagccggaaacctccaagcagaattaagcccaa
aagtgggaagaagaatgcaggaccaaaaaagaggcaacttgattcattggaggatgagga
ggaggaagaggaggaagaggaggatgattatgataagagaggatctcgtcgccaggcaac
agtcaacattagttacaaagaagctgaagaaaccaagacagattctgatgatttgctgga
agtttatggagaagatgtcccacaaactgaagaagatgaatttgaaactatagagaagtt
catggatagtagagttggccgaaaaggagccacgggtgctgcaaccaccatttatgcagt
tgaggcagacggtgacccaaatgctggatttgaaaagtcaaaggagccaggagaaataca
gtatcttattaaatggaaaggttggtcacacatccataacacttgggaaactgaggaaac
gctgaagcaacaaaatgttaaaggaatgaagaaattggacaactacaagaaaaaggatca
ggaaacaaaacgatggttgaaaaacgcttctccagaagatgtggaatattacaattgcca
gcaggagcttacagatgatctacataaacaatatcagatagtggaaagaataattgctca
ttcaaatcagaaatcagcagctggttatccagactactattgtaaatggcagggtctgcc
ttattcagaatgtagctgggaagacggtgcgctcatttccaaaaagtttcaagcacgcat
tgatgagtactttagcagaaatcaatccaagaccactccttttaaggactgcaaggctct
aaaacagaggccaaggtttgttgcactaaagaagcaaccatcttacattggaggacatga
aactttagagttaagagattatcagttaaatggattgaattggcttgctcactcatggtg
caaagggaatagctgtattctcgcagatgaaatgggtctgggtaaaacaatacaaacaat
ttcttttctgaactacctgtttcacgagcatcaattgtatgggccttttttgctggttgt
gccactttctaccttgacatcttggcaaagagagattcaaacttgggctcctcagatgaa
tgctgtagtttacttaggagatgtaactagcagaaatatgataagaactcatgaatggat
gcacccacaaaccagacgattaaaatttaacatacttctaacaacgtatgaaattttgct
gaaggataagtcattccttggtggtctgaattgggcgttcataggagttgacgaagctca
tcgtttaaaaaatgatgactcccttctgtacaagactttaatagattttaagtctaacca
tcgtcttcttattactggaacccctctgcaaaactccctcaaagagctttggtctttgtt
gcacttcatcatgccagaaaagttttcttcctgggaagattttgaagaggagcatggcaa
agggagagagtatggttatgcaagtcttcacaaagaacttgaaccatttctgctgagaag
agttaaaaaggatgtagaaaagtctttacctgctaaagttgagcaaattctgaggatgga
aatgagtgcgttgcagaagcaatattacaagtggattttaactaggaattataaagccct
cagtaagggttcaaaaggcagtacctcaggctttttgaacatcatgatggaactcaagaa
gtgttgtaaccattgctacctcattaaaccaccggatgataatgaattctataataaaca
ggaggccttacagcatttaatacgtagcagcgggaaactaatccttcttgacaagctact
gattcgtctgcgagaacgtggcaacagagttctaattttctcacagatggtgaggatgct
ggacatcctggcagagtatctgaagtatcgtcagtttccctttcagagacttgatggatc
aataaaaggggaattgaggaaacaagcactggatcattttaatgcagaaggatcagagga
tttctgctttttactctctaccagagctggaggattaggtatcaacttggcatctgctga
cactgtagttatatttgattctgattggaatccacagaacgatctacaagcacaggctag
agcgcataggattggacagaagaaacaggttaatatttatcggctggtcacaaaaggatc
agtagaagaagatattcttgaaagagccaagaaaaagatggtgttggatcatttagtaat
tcagagaatggacactacagggaaaaccatactacatacaggctctactccttcaagctc
aaccccttttaataaggaggaattatcagcaattttgaagtttggtgctgaggaactttt
taaagaacctgaaggggaagaacaggagccccaggaaatggatatagatgaaatcttgaa
gagggctgaaactcgggaaaatgagccaggtccattaactgtaggagatgagttgctttc
acagttcaaggtggccaacttttccaatatggatgaagatgatattgagttggaaccaga
aagaaattcaagaaattgggaagaaatcattccagaagtccagcggcgaagaatagaaga
ggaggaaagacaaaaagaacttgaagaaatatacatgctcccaagaatgagaaactgtgc
aaaacaggtgtgtcttgattctgactga
DBGET
integrated database retrieval system
