Phaethon lepturus (White-tailed tropicbird): 104628508
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Entry
104628508 CDS
T08325
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104628508 (TNRC6A)
03036 Chromosome and associated proteins [BR:
plet03036
]
104628508 (TNRC6A)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104628508 (TNRC6A)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104628508 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104628508
NCBI-ProteinID:
XP_010295430
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGSDKEAWPSI
TGSDPELTSECMDTDSASSSGSERNLVIMASGSTGGENDGIRNGIGHGSQNKFVVGSNSN
NVGNGSINGPWGLSHGTIISTCQVSVDAPDSKSESSNNRMNAWGTINPSSNGGLNPSTLN
SNGNHGAWPVLENNGHALKGSVGSGNPGTNIQCSTIGQISNSQSINSKVGGSAHSSWGSL
QENCDSEVNGTRKVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQINELPNNTGHG
AWRVSTMNHSQIQASPVTNGTSISHLSNGEAKNGGSYGTTWGAYGSNYSGDKCSGPNSQA
NGDTVNATLMQPGISGPGSTNFQINGNKGGGVWEAGTVNSQNMPWGSGNGASAGGSRRGW
GNPAQNTGTNISNGEWSKLPSNQHSNEGVNGNSRKFTNGWKSTEEEDLNSQSSAASQITE
QNSAWAKTGTGDSEGSSESTGCHEDRVTTEGQNRERRKVDQHALLQSIVNRTDLDPRVLS
NSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPSPNNNDTSS
VSGWGDPKSSTRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWNDTQKIKQG
WVDGQKASQGWAVSAGDSWGENSRSNHWGEAKKSSSGGSDSDRSVSGWNEPGKSNSVTWG
GNNTNPNNSSGWDEPAKSNQNQGWGDPPKSSQPQGWGDSSKPINSPEWNKQDVGSWGAPS
ATNKPPGSGWLGGPMPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVN
MWNKNVPNSSSSSDQQAQVHQQLLSSSAMSSKESSSGSGWGEPSTPATTVDNGTSAWGKP
MDTGTSWGEPISDAAGTSGWGNASLGQQASNKPGPKSMQDSWCGDDMPLTGSRQTSWEEE
EDVEIGMWNSSSSQEANPSLNWPPYMKKMPTKGIMKGGNKQDETWINPFIKQFTNLSFSR
ESPEETIQSNKMDMSGGLLQDKRMEMDKHGLNVGDYNRVVGKGPGSRPQISKESSMDRGP
YFDKNGNPSMFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPVSLLKYAP
NNGGLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQNQRSMPSGGRQQQEQQG
RSLSMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPTMKSFLENVIPHATPELQKGPSP
INAFSSFPIGMNSNLNVNMDMSSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGF
RLEESPFVPYDFMNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNI
DPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVS
LSSTAQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPPGLTGQKPP
LSTWDNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQH
GPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQGQ
SLTPSPGWQSLGSSQNRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGTSLWGSPNY
STSLWGTPSSNDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccattcgggacttggtgagccactcccctaaccagtcagatctgaaccacagt
ggtctaggatcccattatgaaaattctcactggggaccagtctcttcaaatagtgactcc
agcacaaactgggataaagttattgtagacggctctgacaaagaagcatggccatcaatc
actggcagtgacccagagttgacatcagaatgtatggacactgactctgcctctagctct
gggtcagagagaaacctcgtgataatggcttcagggagcacaggtggtgaaaatgatggc
attcgaaatggcattggacatggttctcaaaataagtttgtggttggtagcaacagcaat
aatgtgggcaatggaagtattaatgggccgtggggtttatcccatggaaccataataagc
acatgtcaagtttctgtggatgctcctgacagcaaatctgaaagtagcaacaatagaatg
aatgcttggggcaccataaacccttcatcaaatggagggttaaatccaagcactttgaat
tcaaatggcaaccatggtgcctggcctgtattggagaacaatggacatgccctgaaaggg
tctgtagggagtggtaatcctggcacaaatattcagtgcagtaccataggtcagatatct
aatagtcagagtattaactctaaagtgggtggttcagcccacagttcctggggaagcctt
caggaaaattgtgattctgaagtaaatggtacaaggaaggtttcattcagtgggcaacct
caaaaccttaacactgaaatgaatggaccaaataacactactaactttatgacctctagt
ttaccaaactctgctggttcagtgcagattaatgaactgcctaataatacagggcatggg
gcctggcgtgtgagcacaatgaatcattctcagattcaggcctctccagttacaaatggc
acttccatttctcatcttagcaatggtgaggcgaaaaatggtggatcttatggtactaca
tggggtgcctatggttctaattactctggagacaaatgttcaggcccaaacagccaagct
aatggtgacactgtgaatgcaactctaatgcagccaggcattagcgggcctggcagcact
aactttcaaatcaatgggaataaaggaggaggggtgtgggaggcagggacagtcaactcc
cagaacatgccatggggaagtggaaatggtgcaagtgctggcgggagtagaagaggatgg
ggcaaccctgcacaaaacactggcactaacatttcaaatggggagtggagtaaactgcct
agtaatcagcattccaatgaaggtgtgaacggaaacagcaggaagtttacaaacggatgg
aagtctactgaggaggaggaccttaacagccagagctctgctgcctctcagataactgag
cagaacagcgcatgggccaaaacaggtacgggggacagcgaaggtagttcggagagcact
ggatgccatgaagatagagtaactacagaaggacagaatcgagagagaaggaaagttgac
cagcatgcattactccaaagtatagtgaacagaactgacttagatccacgtgtcctttcc
aactctggttggggacagactccaatcaaacagaacactgcctgggataccgaaacatca
ccaaggggtgaaagaaaaactgacaatgggacagaggcctggggaggctctgtgacacag
acttccagctcagggggatgtgtggatagacctagccctaataataatgatacctcatct
gtatcagggtggggagatccaaagtcttctacaaggtggggagactccaaagggtcaaac
agccaaggggggtgggaagaagattctgctgctacagtaatggtcaagagcaatcaatca
tggggaagtggcaaagaggaaaagtcatcttggaatgacacacagaagatcaaacaagga
tgggtagatggacaaaaggccagccagggttgggcagtttctgctggtgatagctggggt
gaaaattcaagaagtaaccattggggtgaggctaagaaatccagttcaggaggtagcgac
agtgacagatcagtatctggttggaatgagccaggtaaatcaaattctgttacttgggga
ggtaataatacaaacccaaataattcttcaggatgggatgagcctgcaaagtctaatcag
aaccagggctggggagaccctcctaaatccagtcagcctcaaggttggggggattcgtca
aagccaatcaactctccagaatggaacaaacaagatgttggctcttggggagcaccatct
gccacaaacaaacccccagggtcaggctggctgggtggaccgatgccggcaccagcaaag
gaggaagaacccactggctgggaggagccatcccctgaatcaatacgccgtaaaatggaa
attgatgatggaacttccgcttggggtgatccaagcaaatacaactacaaaaatgtgaat
atgtggaataaaaatgtcccaaacagtagcagcagttcagaccagcaagcacaggtacat
cagcagctactgtcttcaagtgccatgtctagcaaggagagcagttcgggttccggttgg
ggagagccttctactccagccactactgtagataatggaacttcagcgtggggtaaaccc
atggatactggtactagctggggagagcccatcagcgatgcagcaggcacctctggctgg
ggaaacgcttctcttggtcaacaggcttcaaataaacctgggcctaaatctatgcaagat
agttggtgtggagatgatatgccactgacaggcagtcgtcagaccagctgggaggaagag
gaggatgtggagattggaatgtggaacagcagttcttcacaggaagctaacccatcttta
aattggccaccatacatgaaaaaaatgcccacaaagggaataatgaaaggtggaaataag
caagatgaaacatggatcaatcccttcattaagcaattcacaaatctcagtttttcaaga
gaatcaccagaagaaaccatacagagcaataagatggacatgtctggagggttattgcaa
gataaacggatggaaatggataagcatggcctcaatgttggagattacaatcgtgtggtt
ggaaaaggccctggttctcgtcctcaaatttccaaagagtcttccatggatcgcggtcct
tattttgataagaatggcaatcccagtatgtttggtgttggtaatatagcagcacagccc
aggagcatgcagcagcctccagcacaacctcttaattcatctcagcctaatccacgtgct
caagtgcctcctccattactatcccctcaggttccagtatcattactgaagtatgcacca
aacaacggtggcctgagcccactttttggcccacaacaggtagccatgttgaatcaactg
tcccagttaaaccagctttctcagatctcccagttacagcggttgttggctcagcagcaa
aaagcgcagaatcaaagaagcatgccttctggtggtcgtcaacagcaggagcagcagggt
cgatctcttagtatgcagcaacagatgatgcaacagtcccgtcagcttgacccaaacctg
ttaatgaagcagcaaactccaccctctcaacagcagtcactccatcaacccaccatgaaa
tctttccttgagaatgtcataccccatgctactcctgagctacaaaaagggccatcacca
ataaatgctttcagcagcttccccataggaatgaactcaaacttgaatgtaaacatggat
atgagcagtattaaagagccacaatctcgactgaggaaatggactacagtagacagcatt
tctgtgaacacatcattagatcaaaactccagcaaacatggtgctatttcaagtggtttt
aggctggaagagtctccatttgttccatatgactttatgaacagcagtaattcaccagcc
agtcctcctggatctattggggatggctggccccgtgccaaatcgcctaatggctctagc
agtgttaactggccaccagagtttcgccctggtgagccatggaaaggttatccaaacatc
gaccctgaaactgacccttacgtcactcctggcagtgtcataaacaatctttcaattaat
actgtgcgggaagtcgaccacctcagggacaggaacagtgggtcatcctcatctttgaac
accacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaatgtttcc
ctcagcagtacagcacaaagcacttcagtagccagaaacagtgattccaaatcaacatgg
tctcctggatcagtcactaacacctctctggctcatgagctgtggaaggtccctttgcca
cctaaaagcatcactgctccgtcccgcccacctccagggctaacaggccagaaaccaccg
ttgtccacttgggataattcccttcgcttgggtggaggatggggaaattctgatgccaga
tatacccctggttcaagctggggtgagagcagctcagggagaataacaaattggcttgtt
ctaaaaaaccttacacctcagattgatggctcaaccctgcgtactctgtgcatgcagcac
ggtccactaataacattccaccttaacctcccacatggtaatgctttggtccgttacagt
tcaaaagaagaggtagtgaaggcacaaaaatctctgcacatgtgtgtattagggaacact
actattcttgctgagtttgccagtgaagaggagattagtcgcttctttgcacaaggccag
tctctgactccgtctcctggctggcaatctctcggatccagccagaaccgacttggatcc
attgatggttcccattcgttctcaaaccgtaatgatctaaatcactggaatggtgctggg
ctgtcgggaactagcagtggagaccttcatggcacttcactttgggggagccccaactat
tccacaagcctgtggggcaccccgagcagcaatgacaccaggggaattagcagcccatcc
cccatcaacgctttcctttctgttgaccacctaggtggaggtggagagtccatgtaa
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integrated database retrieval system
