Phaethon lepturus (White-tailed tropicbird): 104628709
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Entry
104628709 CDS
T08325
Symbol
LRFN5
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104628709 (LRFN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plet04515
]
104628709 (LRFN5)
04990 Domain-containing proteins not elsewhere classified [BR:
plet04990
]
104628709 (LRFN5)
Cell adhesion molecules [BR:
plet04515
]
Immunoglobulin superfamily
SALM family
104628709 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
plet04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
104628709 (LRFN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_9
Ig_2
C2-set_2
LSR
Ig_PDGFR_d4
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
104628709
NCBI-ProteinID:
XP_010295677
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MEKLLLFLLFIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVLALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDHIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPTLLSGRYFWSIPEEEFLCEPPLITRHTHELRVLE
GQRAALRCKARGDPEPAIHWISPEGKLISNATRSVVYDNGTLDILITTVKDTGSFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKVSQDK
KVVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDSLVYRXGSPSPPAPGP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttttgtttttgctgttcattggcatagcggtgagagctcagatctgc
ccaaagcgctgtgtctgtcagattttgtctccgaaccttgccaccctttgtgccaagaaa
gggctcttatttgttcctcccaacattgacaggaggaccgtggagttacggctggcagac
aactttgttacaaacattaaaaggaaagactttgccaatatgaccagcctggtggacctg
acgctgtccaggaatacaatcagttttattacacctcacgcatttgctgacttgcgcaat
ttgcgggctttgcatttgaacagcaaccgattgactaagatcaccaacgacatgttcagt
ggactctccaatcttcaccacttgatacttaacaacaaccagcttactttaatttcttcc
acagctttcgatgatgttttagctcttgaggaattggatttgtcttacaacaatctggaa
accatcccctgggatgcagttgagaagatggttagtttgcacactctcagtctagaccac
aacatgattgaccatattccgaaggggaccttctcccacctccacaagatgaccaggttg
gacgtcacatctaacaaactgcagaagctaccgcctgatcctctcttccagcgagctcag
gtactagcaacctcaggaattatcagcccctcgacttttgcattgagctttggtgggaac
cctttgcattgcaactgtgagcttttgtggttgcggcgtctttcgagggaagatgacctg
gagacctgtgcttctcccacgctcttgtccggccggtacttctggtcgatccccgaggag
gagttcctgtgcgagccgcctctcatcacccggcacacccatgagctgcgggtgctggag
ggccagcgggcagcgctgcggtgtaaggcccggggggaccccgaaccagcaattcattgg
atttcacccgaggggaaactgatttcaaacgcaacgaggtctgtggtgtacgacaacggg
acgcttgacatccttataacaacggtgaaggacacgggctccttcacctgcattgcttcc
aatccggctggggaggccacgcagacggtggacctgcacataatcaaactcccccatttg
ctgaacagcacgaaccacatccacgagcccgaccctggctcctcggatatctccacttcc
accaagtcaggctccaacgcgagcagtagcaacggggatactaaagtcagccaagataag
aaggtggttgttgcggaagcaacgtcctcaaccgctctgctgaaattcaattttcagagg
aatatacctgggatacgtatgttccaaatccaatacaacggtacttacgatgactccctt
gtttacaggtaaggcagccccagcccgcctgcgccggggccctga
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