Peromyscus leucopus (white-footed mouse): 114680593
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Entry
114680593 CDS
T07241
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
114680593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114680593
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114680593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
FUT8_N_cat
Pns11_12
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
114680593
NCBI-ProteinID:
XP_028709390
LinkDB
All DBs
Position
4:complement(43144652..43290836)
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AA seq
2009 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNSSLEEHSIERNVTRDY
NGTLVNETVFEFDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYVCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAATASEHSREPSAAGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSVRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTDHFNHVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKIASDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGIAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNRKDNCISNHTAEIGKDLDCLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPAEEQPVMEPEETLEPEACFTEGCVRRFKCCQISVEEGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTT
TGDMFEITEVNNHSDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSDHVTSILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPD
CDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRVQMEERFMASNPSKVSYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFTYNKNKLKGGANLLVKEDMIIDRINENSITEKTDLTMSTA
VCPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcagctattgaaagacgcattgcagaagaaaaggctaagaatcccaagccagac
aaaaaagatgatgacgaaaatggcccaaagccaaatagtgacttggaagctgggaagaac
cttccatttatctatggagacattcctccagagatggtgtcggagcctctggaggacctg
gacccttactatatcaataagaagacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctccgccctgtacatcctcactcccttcaatcctcttaggaaaata
gctattaagattttggtacactcattattcagcatgttaattatgtgcactattttgaca
aactgtgtgtttatgacaatgagcaaccctcctgactggacaaagaatgtagaatacacc
ttcacaggaatatatacttttgaatcgctaataaaaattattgcaaggggtttctgttta
gaagattttactttccttcgtgatccatggaactggcttgacttcactgtcattaccttt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacgttcagagtt
ctccgagcattgaaaactatttcagtcattccaggactgaagaccatcgtgggggccctg
atccagtcggtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagtgtc
tttgctctaatcgggctgcagctcttcatgggcaacctgaggaataaatgtgtacaatgg
cctcccaccaactcttcccttgaggaacatagcatagagaggaatgtgactcgagattat
aacggcacacttgtaaatgaaaccgtgtttgagtttgactggaaatcatatattcaagac
tcaagatatcattatttcctggagggttttttagatgcactactgtgtggaaatagctct
gatgcaggccaatgtccagaaggatatgtatgtgtaaaagctggtagaaaccctaattat
ggttacacaagctttgataccttcagctgggcgtttttgtccctgtttcgactgatgact
caggacttctgggaaaatctttaccaactgacattgcgtgctgctgggaaaacatacatg
atattttttgtgctggtgattttcctgggctcattctacctgataaacttgatcctggct
gtggtagccatggcctatgaggaacagaatcaggccaccttggaggaggctgaacagaaa
gaggcggagtttcagcagatgttggagcaacttaagaagcagcaggaggctgcacagcag
gcggcagctgcaactgcctcagaacattccagagagcccagtgcagcaggtaggctctca
gatagctcttcagaagcctccaagttgagttcgaagagtgctaaggaaagacggaatcgg
cggaagaaaagaaaacagaaagagcagtctggaggggaagagaaagatgaggatgaattc
cacaagtctgagtctgaagacagcgtcagaaggaaagggtttcgcttctccatagaaggg
aacagactgacctatgaaaagaggtactcttccccacaccagtcactgctgagcatccgt
ggttccctgttttccccaagacgcaatagcagaacaagccttttcagctttagagggcga
gcaaaggatgtggggtctgagaatgactttgctgatgatgagcacagcacctttgaggat
aatgagagccggagagattcactatttgttccccgaagacatggagaacgccgcaacagt
aacctgagtcaaaccagcaggtcatcccggatgctggcggtgtttccagcaaatggaaag
atgcacagcacagtggattgcaacggtgtggtttccttggttggtggaccctcagttcct
acatctccagttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatggaacgaccactgaaactgaaatgagaaagaggaggtcaagttctttccatgtttca
atggacttcctagaagatccttcccaaaggcaaagggcaatgagtatagccagcatctta
acaaatacagtagaagaactagaagaatcaaggcagaaatgtccaccctgttggtataaa
ttttccaacatattcttaatttgggactgttccccatattggcttaaagtcaaacatatt
gtcaacctggttgtgatggacccatttgttgatctggccatcaccatctgtattgtgtta
aatacccttttcatggccatggagcactacccaatgacggatcatttcaatcatgtgctt
acagtaggaaacttggtttttactgggatcttcacggcagaaatgttcctgaaaatcatt
gccatggacccgtactattatttccaagaaggatggaatatctttgatggtttcattgtg
acactaagcctggtagaacttggccttgccaatgtggaaggactgtccgttctccgttca
tttcgactgctccgagtgttcaagttggcaaaatcctggcccacactgaatatgctcatt
aagatcattggtaactcggtgggcgcactgggcaacctgaccctggtgttggccatcatt
gtcttcatttttgccgtggtcggcatgcagctgtttggcaaaagttataaagattgtgtc
tgcaaaattgccagtgactgcaagctcccacgctggcacatgaatgacttcttccactcc
ttcctgatcgtgttccgtgtgctgtgtggagagtggatagagaccatgtgggactgcatg
gaggttgctggccaagccatgtgccttactgtcttcatgatggtcatggtgattgggaac
cttgtggtcctgaacctctttctggccttgcttctgagctcatttagtgcagacaacctt
gcagccactgatgatgacaatgaaatgaacaatcttcaaattgctgtggacaggatgcac
aagggaatagcatatgtaaaaagaaaaatatatgagtttatccagcagtcctttgttagg
aaacagaagattttagatgaaattaagccacttgatgatctaaacaacagaaaagacaat
tgtatatctaaccacacagcagaaattggaaaagatctggactgtctgaaagatgtgaat
ggaaccacaagtggcatagggactggcagcagcgtggagaagtatatcattgatgagagt
gattacatgtcattcataaacaaccccagtctcaccgtgactgttcccattgctgtggga
gagtctgactttgagaacttaaacacagaggacttcagcagtgaatcagatctagaagaa
agcaaagagaaactcaatgaaagcagcagctcttcagaagggagcactgtggacattggg
gcacctgcagaggaacagcctgtcatggaacccgaagaaacccttgagcccgaagcctgc
ttcactgaaggctgtgtacggagattcaagtgctgtcaaattagcgtggaagaagggaga
ggcaagcagtggtggaacctgcgtagaacgtgcttccggatagtggaacacaactggttt
gagaccttcattgtgttcatgattctcctgagtagcggtgctctggcttttgaagatata
tacattgatcagcgaaagacgatcaagaccatgcttgaatatgctgacaaagtcttcact
tacatcttcatcctggaaatgcttctcaaatgggtggcctatggctatcaaacatatttt
accaatgcctggtgttggcttgacttcttaatagttgatgtttcattggtcagtttaaca
gcaaatgccctgggttactctgaactcggggccatcaaatccctcaggacactaagagct
ctgagacctctaagagcattatcacgatttgaagggatgagggtggttgtgaatgccctg
ttaggagcaattccatccatcatgaatgtccttctggtttgtcttatattctggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctaccactgtattaacaccaca
actggtgacatgtttgagatcaccgaagtgaataatcattctgattgcctaaaactaata
gaaagaaatgaaactgcccgatggaaaaatgtgaaagtaaactttgataatgtaggattt
gggtatctctctttgcttcaagttgccacgtttaagggatggatggacatcatgtatgca
gcagttgactccagaaatgtggaacttcagcctaagtatgaggaaagcctgtatatgtat
ctctactttgtcatcttcatcatctttgggtccttctttaccctgaacctatttattggt
gtcatcatagacaatttcaaccagcaaaagaagaagtttggaggtcaagacatctttatg
actgaagaacagaagaaatactataatgcaatgaagaaattaggatcaaaaaagccacaa
aagcctatccctcgaccaggaaacaaatttcaaggaatggtgtttgactttgtaaccaga
caagtgttcgacatcagcatcatgattctcatctgtctgaacatggttacaatgatggtg
gaaacggatgaccagagcgaccatgtgactagcattttgtcacgcatcaacctggtgttc
atcgtactgttcactggcgagtgtgtgctgaagctcatctccctccgccattactatttc
accattggatggaatatttttgattttgtggtggtcattctctccattgtaggaatgttt
ctggccgagctgatagagaagtactttgtgtcccctaccctgttccgagtcatccgcttg
gccaggattggcagaatcctacgcttgatcaaaggcgccaaggggatccgcacgctgctt
tttgctctgatgatgtcccttcctgcgctgttcaacatcggcctcctgcttttcctggtc
atgttcatctatgccatctttgggatgtccaactttgcctacgttaagagggaagttggg
attgatgacatgttcaactttgagaccttcggcaacagcatgatctgcctgtttcaaatc
accacctctgcaggctgggacggactgctggctcccatcctcaatagcaagccccctgac
tgtgatcctaataaagttaaccccggaagctcagtgaagggggattgtgggaacccgtct
gtggggattttcttttttgtcagctacatcatcatatccttcctggttgtggtgaacatg
tacatcgctgtcatcctggagaacttcagcgtcgccacggaggaaagtgcagagcccctg
agtgaggacgactttgagatgttctatgaggtctgggagaagttcgaccctgatgccact
cagttcatggaatttgaaaaattatctcagtttgcagctgctcttgaaccccctctcaac
ttgccgcaaccaaacaaacttcagctcattgccatggatctgcccatggtgagtggagac
cgcatccactgcctggacatcttatttgcttttacaaagcgggttttgggtgagagcgga
gagatggacgcccttcgagtccagatggaagagcggttcatggcttccaacccctccaaa
gtctcttatcagccaatcacgactactttaaaacggaaacaagaggaggtgtcagctgtt
atcattcagcgtgcttacaggcgccaccttttgaagcgaacggtcaaacaagcttcgttc
acctacaataagaacaaactcaaaggtggggctaatcttcttgtaaaagaagacatgatc
attgacaggataaacgaaaactctattacagagaaaaccgacctgacaatgtccaccgca
gtttgcccaccctcctacgatcgggtgacaaagcctatcgtggaaaaacacgagcaggaa
ggaaaagatgaaaaggccaaaggaaaatga
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integrated database retrieval system
