Peromyscus leucopus (white-footed mouse): 114680660
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Entry
114680660 CDS
T07241
Symbol
Pcdh11x
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114680660 (Pcdh11x)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pleu01009
]
114680660 (Pcdh11x)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114680660 (Pcdh11x)
Protein phosphatases and associated proteins [BR:
pleu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114680660 (Pcdh11x)
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114680660 (Pcdh11x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
FAM47
LYRIC
SPAR
EphA2_TM
7tm_3
Drf_FH1
DUF6377
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
114680660
NCBI-ProteinID:
XP_028709511
LinkDB
All DBs
Position
X:77949480..78561595
Genome browser
AA seq
1343 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGILLDARCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNSPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIK
GQNAFGLDIIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNHPVFVEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLF
HLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTPASAMVLVNVTDINDNVPSIDIRYI
VNPTNGTVLLSENAPLNTKIALITVMDRDSEHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNS
PGAQLTKISATDADSGTNAEINYLLGFDAPPEFDLDSRTGILTAVKKLDREKQEKYYFTV
LAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPENLPKHGTVGLITVTDPDYG
ENSAVTLSILDVNNQFTIDPQSGVIRPNISFDREKQESYTFYVKAEDGGRVSRSTTAKVT
INVVDVNDNKPIFIDPPSNYSFEWVLPSTTPGTVIFKVVAVDDDIGMNAELRYSIVGGNT
KGLFTIEQISGNITLKEKCASDLGLHRVIVKANDLGQPDSLFNVVNVNLFVNESVPNATL
IYELVRKSIDSPATQNSETTNSSSPTTDYVKIVVAIVAGTITVVLVIFITAVVRCRQSPH
LKASQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKNAPKNLLLNFVTIEEAKPDDADNDR
NSVTLDLPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSKH
HIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYTVTTFKTPVSVHARPTMKEVVRSR
TPMKEVTTVEIWTHPHPQRRSEGRKPGKSQRRVTFHLPEGSQESISDGGLGDHDAGSLPS
TSHALPLGYPQEEYFDHAAPNNRTEGDGNSDPESTFIPGLKKAAEITVQPTLEEASDNCT
QECLILGHSDSCWMPASLTHPSPPQIQTTALCHSPPRTHTSVRRSSPPVTQTIAICHSPP
VTQAIALCHSPPPVQAGSLQHSPPLAQATPPHHSPPPAQGSVCYSPPLAQAVVIHHSPPL
SQAVTLHRNQGLQQGWVQGAGADGLHPLDQGVQGSTRAQFYTMAERLHSDDDSIKVIPLT
TFTSGQQARSSRGDSPIIEEHPL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcgtcgtgtttcag
tctggcgcccaggagaagaattacacggtccgagaagaaatgccagagaacgtcctgata
ggcgatttgttgaaagacctcaacttgtcgcttattcccgacaagtccttaaccactcct
atgcagttcaaattggtttacaaaaccggggatgtacctctgattcggattgaagagggt
actggtgagatcttcactactggcgctcgcatcgatcgtgagaaattatgtgctggaatc
ttgttggatgcccgttgcttttacgaagtggaagtcgccgttttgccggatgaaattttt
agattggtcaagatacgctttctgatagaagatataaatgataattcaccgttattcccg
acaactgtcatcaacatatcaattccagagaactcggctataaactctcgatattctctt
ccagcagccattgatcctgacatcggaataaatggagtccaaaactaccaactaattaag
ggtcaaaatgctttcggtcttgatatcattgaaacaccagaaggagacaagatgccacag
ctgattgttcaaaaggagttagatagagaagagaaggatacctatgtgatgaaagtaaaa
gttgaagatggtggctttcctcaaagatccagtacagctattttgcaagtaagtgttgct
gatacaaatgacaaccacccagtctttgtagaaaaggaaattgaagtcagtataccagaa
aatgctccaataggttcttcagtgacacagctccatgccacggatgctgacattggtgaa
aatgccagaattcatttttatttcagcaatttagtctccaacattgctaagagattgttc
caccttaataccaccactggacttatcactgtcaaagaaccactggatagggaagaatca
ccaagccacaagttactggttttggcaactgatggtggatcaacaccagcgagcgctatg
gtgctggtaaatgttacagatatcaacgataatgtcccctcaattgacataagatacatc
gtcaatccaaccaatggcactgtgcttctttcagagaatgctccacttaacacaaaaatt
gctctcataactgtgatggatagggattctgaacataatggtagggtgacatgcttcaca
gatcatgaagttcctttcagattacgtccagtattcagtaatcaattcctcttggaaact
gctgcatttcttgactttgagtctacaagagaatatgccatcaaattacttgccgctgat
gctggcaaacctcctttaaatcagtcatccatgctcctgatcaaagtaaaagatgaaaat
gacaatgctccagttttcacccagtctttcataagcctttctgttccggagaataactct
cctggtgcacagttgacaaaaatcagtgcaacagatgcagacagtggaacaaatgctgaa
attaactacctgttaggttttgatgcaccacctgaatttgacctggatagccgtacaggc
atcctgactgcagtgaagaaactagatagagaaaaacaggaaaaatattactttaccgtc
ttggcacaggacaacggaattccacccttaatgtccaatgccactgtctttgtgactgtt
cttgatcagaatgataacagcccaattttcactcacaatgagtacaacttctatgtccct
gagaaccttccaaagcatggcacagtagggctaatcaccgtgactgatcctgattatgga
gaaaattctgcagttactctctccatcttagatgtgaataatcaattcactattgatcca
cagtctggtgtcatccggccaaatatttcatttgacagagaaaaacaagaatcctacact
ttctatgtaaaggctgaggacggtggtagggtatcacgttctacaactgctaaagtaacc
ataaatgtagttgatgttaatgataacaaaccaatttttattgaccctccttccaattac
tcctttgaatgggttttaccatccaccacaccaggcacagtcatcttcaaggttgttgca
gttgatgatgatattggcatgaatgctgagcttcgttacagcattgttggaggaaacaca
aaaggactgtttacgattgaacaaatatcaggcaacatcacactgaaagagaaatgtgct
tcagatcttggtttacacagagtgatagtcaaagctaatgatttaggacaacctgattct
ctcttcaatgttgtaaatgtcaatctgtttgtgaacgaatcagtgcccaatgctacactg
atttatgaactggtgcgcaaaagcatcgactcacctgcaactcaaaatagtgaaacaact
aattcatcctcgccaacaactgactatgtcaagatcgtggttgccattgtcgctggcacc
ataactgttgtcctagtgattttcatcactgctgtagtaagatgtcgccaatcaccacac
cttaaggcttctcagaaaaacaaacaaaattctgagtgggttactccaaacccagaaaat
aggcaaatgattatgatgaagaagaagaagaagaaaaagaagaagaatgcccccaagaac
ctgctgcttaattttgttactattgaagaagcaaaaccggatgatgctgacaatgataga
aacagtgtcacactagaccttcccattgagctggaagagcaaacgatgggcaaatacaac
tggggcactacacctactacattcaagcctgacagccctgatttggctagacactacaaa
tctgcttctcctcagcctgcattccagatccagcctgaaacacccctgaactcaaagcac
cacatcattcaggaactgcctcttgacaatacttttgtaggctgtgattccatctccaag
tgctcttccagcagttctgatccctacagtgtttctgagtgcagctatacagtgacaacc
ttcaagactcctgtgtctgttcatgccagaccgacaatgaaggaggtggtacgatctcgt
acccccatgaaagaagtaacaactgtggaaatctggactcatcctcatccacagcggaga
tctgaaggaagaaagccaggaaagtcccagcgacgtgtcacatttcacctaccagaaggc
tctcaggaaagcatcagtgatggtggattgggagaccatgatgcaggcagccttcccagc
acatcccatgccctgcctcttggctatcctcaggaagagtactttgatcatgccgcacca
aacaatcgcactgaaggggatggcaactctgatccagaatctactttcattcctggacta
aagaaagctgcagaaataacagtgcagccaactctggaagaagcctctgacaactgtact
caagaatgcctcattttgggccactctgactcctgctggatgccagcttctctgacccat
ccaagccctccacagatacagaccactgctctctgccacagcccacctaggacgcacaca
tctgttcgtcgcagcagccctccagtgacacagactatcgctatctgccacagcccccct
gtgacccaggctattgcactgtgtcatagccctccaccagtacaggcaggttctctccag
cacagtcctcctttagcacaggctactccaccccaccatagcccaccaccagcacagggc
tctgtctgctacagcccgcctctggcacaggctgtggtaattcaccacagtcctcctctg
tcacaagctgttacactccatcgtaatcagggtttgcagcaaggatgggtgcagggtgct
ggagctgatggactgcatcccctcgatcagggagtacagggtagcacaagagctcagttt
tacaccatggctgaaagacttcattctgatgatgactcaattaaagtcattcccttgacc
acctttacttcaggtcaacaggccagatcctcaaggggtgattctccaatcatagaagaa
caccccttgtaa
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