Peromyscus leucopus (white-footed mouse): 114680742
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Entry
114680742 CDS
T07241
Symbol
Traf7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114680742 (Traf7)
Enzymes [BR:
pleu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114680742 (Traf7)
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114680742 (Traf7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
DSE1_N
Beta-prop_SCAP
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
NBCH_WD40
Beta-prop_Aladin
zf-RING_UBOX
Beta-prop_WDR41
Beta-prop_SPT8
zf-C3HC4
Beta-prop_DCAF4
ASA1
zf-C3HC4_2
zf-TRAF
zf-C3HC4_4
WD40_like
Sina_ZnF
Beta-prop_IFT140_2nd
PAC11
zf-C3HC4_3
Beta-prop_Nup120_160
TRM82_WD
CEP135_TSGA10_CC
zf-RING_5
WD40_MABP1-WDR62_1st
PKcGMP_CC
PII1_coiled_coil
CRWN_N
Rod_CreS
CCDC39
WDR90_beta-prop_4th
CCDC18_2nd
Filament
DUF4164
Ccdc27
U-box
DUF16
CLIP1
DGT4
DUF8567
Motif
Other DBs
NCBI-GeneID:
114680742
NCBI-ProteinID:
XP_028709691
LinkDB
All DBs
Position
8b:complement(3101257..3120190)
Genome browser
AA seq
670 aa
AA seq
DB search
MSSAKSARYNRFSGGPANLPSPDSSGTRMETTFGPTFSTVTTITKAADGTSTYKQHRRTP
SSSSTLAYSPRDEEDSMPPINTPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCRHGCHAAGTGKPGVFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHE
MHVALAQKDQEIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT
IKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagccaagagtgcccgctacaaccgcttctctggggggcccgccaaccttccc
tccccagacagcagtgggaccagaatggaaacgacctttgggcctaccttctcgaccgtc
accaccatcaccaaagcagctgatgggaccagcacatacaaacagcatcgcaggacgcct
tcctcctctagcacccttgcctattcgccacgggatgaagaggacagcatgccccctatc
aacacccctcgccgctctgactcagccatctctgtccgctccctacactccgagtccagc
atgtccctgcgctccacgttctcgctgcctgaggaggaggaggaaccggaaccattggtg
tttgccgagcagccctcggtaaaactgtgctgccagctctgctgcagtgtgttcaaggac
cctgtgatcactacgtgtgggcacacattctgcagacgatgcgccttgaagtcagagaag
tgtcctgtggacaatgccaagctgacagtggtggtcaacaacattgcggtagctgagcag
attggagagctcttcatacattgccggcatggctgccatgcagcgggcactgggaagcct
ggcgtctttgaggtagacccgaggggctgccccttcaccatcaagcttagtgcccggaag
gaccacgagagtagctgtgactacaggcctgtgcgctgccccaacaaccccagctgccct
ccccttctcaagatgaacctggaggcccacctgaaagaatgcgagcacatcaagtgtccc
cactccaagtacgggtgcacattcatcgggaatcaggacacatatgagacgcacctggaa
acgtgccgctttgagggcctgaaggagttcctgcagcagactgatgaccgcttccatgag
atgcatgtggcgctggcccagaaggaccaagagattgccttcctgcgctccatgctgggc
aagctctcagagaagattgaccagctggagaagagccttgagctcaagtttgatgtcctt
gatgagaaccagagcaagctcagtgaggacctcatggagttccggagggatgcatccatg
ttaaacgacgagctctcgcacatcaacgcacgcctgaacatgggcatcctcggatcctat
gaccctcagcagatcttcaagtgcaaagggaccttcgtgggccaccagggcccggtctgg
tgcctctgtgtctattccatgggtgacctgctcttcagtggctcttctgacaagacgatc
aaggtgtgggacacgtgtaccacttacaagtgccaaaagacactggagggtcatgatggt
attgtgctggcgctctgcatccaggggtgcaagctgtacagtgggtctgcagactgcacc
atcattgtgtgggacatccagaacctgcagaaggtaaacaccatccgtgcccacgacaac
cctgtgtgcacactggtgtcctcccataacatgctcttcagcggctccctgaaggccatc
aaggtctgggacatcgtgggcaccgagctaaagttgaagaaggagctcacaggcctcaac
cactgggtgcgggccctggtggcagcacagagctatctgtacagtggctcttaccagaca
atcaagatctgggacattcggacccttgactgcatccatgtcctgcagacatctggtggc
agtgtctattccattgctgtgacaaatcaccacattgtctgtggcacctacgagaacctc
atccatgtatgggacattgagtccaaagagcaggtgcggaccctaacgggccatgtgggc
acagtatatgccctggcagtcatttcaacaccagaccagaccaaagtcttcagtgcatcc
tatgaccggtccctcagggtctggagtatggacaacatgatctgcacacagacattgctg
cgccatcagggcagtgtcactgccctggctgtttcccggggccggctcttctcaggggct
gtggatagcaccgtgaaggtttggacatgctaa
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