Peromyscus leucopus (white-footed mouse): 114680746
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Entry
114680746 CDS
T07241
Symbol
Abca3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114680746 (Abca3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleu02000
]
114680746 (Abca3)
Transporters [BR:
pleu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114680746 (Abca3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_15
AAA_22
AAA_23
RsgA_GTPase
AAA_29
MukB
AAA_27
Motif
Other DBs
NCBI-GeneID:
114680746
NCBI-ProteinID:
XP_028709704
LinkDB
All DBs
Position
8b:2931078..2992517
Genome browser
AA seq
1704 aa
AA seq
DB search
MAVLRQLALLLWKNYTLKKRKVLVTALELLLPLLFSGILIWLRLKIQSENVPNATVYQGQ
SIQQLPLFFSFPPPGDSWELAYIPSHSDAARTITETVKRELVINMRVHGFSSEKDFEDYI
RYDNRSSNVLAAVVFEHTFNHSKDPLPLAVKYHLRFSYTRRNYMWTQTGNIFLRETEGWH
TTSLFPLFPSPGPREPLSADGGEPGYIREGFLAVQHAVDKAIMHYHANASAHQLFQKLVV
ITKRFPFPPYISDPFLIAIQYQLPLLLMLSFTYTSLSIIRAVVQEKEKKLKEYMRMMGLS
SWLHWSAWFLMFFLFFLIMVAFMTLLFCVKVKKDVAVLSNSDPSLVLAFLLCFAISSISF
SFMVSTFFSKANIAAAVGGFLYYFTFSPYYFVAPRYNWMTLSQKLLSCLLSNVAMAMGAQ
LIGKFEAKGTGIQWRDLLNPVNVDDDFCFGQVLGMLLLDSVLYGLVTWYVEAVFPGQFGV
PQPWYFFLMPSYWCGNTRTVVGKKEEDSDPEKALRTEYFEAEPDDLVAGIKIKHLSKVFQ
VGNKDKVGIRDLNLNLYEGQITVLLGHNGAGKTTTMSMLTGLFPPTSGHAYIHGYEISQD
MVQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSLQKCPEEVKQMLHILGLEDKRDL
RSKFLSGGMKRKLSIGIALIAGSKVLMLDEPTTGMDAVSRRAVWDLLQQQKNDRTILLTT
HFMDEADLLGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEGISQLVHHH
VPNAMLESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWALDGNLCGVMDPTNGIGALIEEEEAILKLNTG
LALHCQQFWAMFLKKAAYSWREWKMVAAQVLVPVTCITLALLAINYTSEILDDPLLKLSL
NEYGRTVVPFSVSGTSQLDRQLSEHLTDMLQAEGQEHREVLGDLEEFLVFRASVEGGGFN
ERCLVATSFKDTGERTVVTALFNNQAYHSPATALAIVDNLLFKLLCGPRASIEISNYPQP
RSTLQVAKDQFNEGRKGFDIALNLLIAMAFLASTFSILAVSERAVRAKHVQFVSGVRVAT
FWLSALLWDLISFFIPSLLLLVVFQAFDVHAFTRDGHLGDLLLLLMLYGWAIIPLMYLMS
FFFSAASTAYARLTIFNILSGIATFIIVTIMRIPAVKLVELSRTLDHVFLVLPNHCLGMA
VSSFYENYETHRYCTSSRVASQYCKKYNIQYQENFYAWSTPGVGKFVTSMAASGCIYLTL
LFLIETNLLWRLRTFICAFQRRWTLAELQNRTSVLPEDQDVADERSRVLVPSLDSMLDTP
LIINELSKVYDQRAPLLAVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDA
FVGGYSISSDIGKVRQRMGYCPQFDALLDHMTGREMLVMYARLRGIPERLISACVENTLR
GLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARA
RESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRSEGK
QEVLEEFKAFVDLTFPGSILEDEHQDMVHYHLPGCDLSWAKVFGILEKAKEKYGVDDYSV
SQISLEQVFLSFAHLQPPTTEDGR
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgctccggcagctggcgctcctgctctggaagaactacactctgaagaaacgg
aaggtcttagtgacagccctggaactcctcctgcccctgctgttttctgggatcctgatt
tggctccgcttgaagatccagtcagagaatgtgcccaatgccacagtttaccagggccag
tccatccagcagctgcccctgttcttttccttcccgccacctggggatagctgggagctc
gcctacatcccttcccacagcgatgctgccaggaccatcacagagacggtgaaaagggag
ctagtgatcaacatgagagtgcatggcttttcctctgagaaggacttcgaggactacatt
cggtatgacaaccgctcctccaacgtgctggcagctgtggtatttgagcacaccttcaac
cacagcaaggaccccctgccactggcggtgaaataccacctacgcttcagttacacacga
agaaattacatgtggacccaaacaggaaatatttttctaagagagaccgaaggctggcac
accacttctctttttccacttttcccaagcccaggaccaagagagcctttatcagctgat
ggtggtgagccagggtacatccgtgaaggcttcctggcagtgcagcatgctgtagacaaa
gccatcatgcattaccatgccaacgcctctgcacaccagctgttccagaagcttgtggtg
atcaccaagaggttcccgttcccaccatacatctcagatccattcctcattgccatccag
taccagttgcctctcctgctcatgctaagcttcacctatacctccctcagcatcatccgg
gccgtggtgcaggagaaagagaaaaaactaaaggagtacatgcgcatgatggggctcagt
agctggctgcactggagtgcttggttcctcatgtttttcctgttcttcctcatcatggtc
gccttcatgaccctgctgttctgtgtcaaagtgaagaaggacgtagcggtcctgtcgaac
agcgacccctccctggtgctggccttcttgctgtgttttgcaatctcctccatctccttc
agcttcatggtcagcaccttcttcagtaaagccaacatagcggccgccgtgggtggcttc
ctgtactacttcaccttcagcccctactatttcgtggctcctcggtacaactggatgaca
ctgagccaaaagctcctatcttgtcttctatctaatgttgccatggcaatgggagcccag
ctcataggaaaatttgaagccaaaggcactggcatccagtggcgtgacctcctgaaccct
gtcaatgtggatgatgacttctgctttggacaagtgctggggatgctgctgctggactcg
gtactctacggcctggtgacctggtatgtggaggccgtcttcccaggccagtttggcgtg
ccccagccctggtacttcttccttatgccctcctactggtgtgggaacacaagaactgtc
gtcgggaagaaggaagaagacagtgacccagaaaaagctctcagaaccgagtactttgaa
gctgagccagatgacctggtagctgggatcaaaatcaagcatctgtccaaggtattccaa
gtgggcaataaggacaaggtgggcatcagagacctgaacctgaacctgtatgaagggcaa
ataacagtcctactgggccacaacggtgctgggaagaccacgactatgtccatgctgaca
ggtctctttccccctacaagtggacatgcatatattcatgggtatgaaatctcccaagac
atggttcaaatccgaaagagtttgggcctgtgtccccagcatgatgtcctatttgacaac
ctgacagttgcggaacatctttacttctatgcacagttgaaaggcctgtctctccagaag
tgtcctgaagaagtcaagcagatgctgcacatcctcggcctggaggacaagcgggacttg
cggtccaagttcctgagtggggggatgaagcgcaagctctccattggcatcgccctcata
gctgggtccaaggtactgatgttagatgagcccaccacaggcatggatgcagtgtccagg
agggccgtttgggaccttctccagcagcagaagaatgaccgtactattctgctgaccacc
cacttcatggatgaagctgacctactgggagaccgcatcgccatcctggccaagggggag
ctacagtgttgtgggtcatcactgttcctcaagcagaaatatggagctggctaccatatg
accctggtgaaagagccacactgcaatcctgaaggtatctctcagctagtacaccatcac
gtccccaatgccatgctggagagccatgctggggctgagctgtccttcattcttcccaag
gaaagcacacacaggtttgaaagtctgtttgctaaactggaaaagaagcagaaggaattg
ggcattgccagcttcggagcctctgtcaccaccatggaggaagtcttccttcgggttggt
aagctggtggacaccagcatggacattcaagccatccagcttcctgctctgcagtaccag
catgagaggcgggcaagtgactgggctttggatggtaacttgtgtggggtgatggacccc
acgaatggcattggagccctcatagaggaagaagaagctatactcaagctcaacacaggg
ctcgccctccactgccagcagttctgggccatgttcctgaagaaggctgcatacagctgg
cgggaatggaagatggtagcggctcaggtcctggtccccgtgacctgcatcaccctggct
ctcctggccatcaactacacctcagagatcctcgatgaccctctcctgaagctaagcctc
aatgagtatggtagaacagtggtgcccttctcagtctcaggcacctctcagctggatcgt
cagttgtccgagcatctaacagacatgctgcaggctgaggggcaggagcatcgggaagtg
ctgggtgacctagaggagttcctggtttttagggcctcagtggaagggggcggctttaat
gagaggtgcctggtagcaacatccttcaaagatacgggagagcggacagtggtcaccgcc
ttgttcaacaaccaggcctaccactccccagccaccgccctggccatcgtggacaatctt
ctgttcaagctgctgtgtggccctcgggcctccattgagatctccaactatccccagccc
cggagcaccctgcaagttgccaaggaccagttcaacgagggccggaagggatttgacatc
gccctgaatttgctcatcgccatggcatttctggccagcacgttttctatcctggcagtc
agtgagagagctgtccgagccaagcacgttcagtttgtgagcggtgtccgcgtggctact
ttctggctttctgctctgctgtgggacctcatctccttcttcattcccagtctactactt
ctggtggtgttccaagccttcgacgtgcacgccttcacgagggacggccacctgggtgac
ttgctgctgctgctcatgctgtacggctgggccatcatccccctcatgtacctcatgagc
ttcttcttctcggctgcgtccacggcttacgccaggctgaccatattcaacatcctgtcg
ggcattgccaccttcatcatcgtcactatcatgcgcatcccagctgtgaaattagtagaa
ctttccagaaccttggatcatgtgttcttggtgctgccaaaccactgcctgggcatggca
gtcagtagcttctacgagaactatgagactcatcggtactgcacttcctcgagggttgct
agccaatactgcaagaagtacaacatccagtaccaggagaacttctatgcctggagcacc
ccaggagttggcaagtttgtgacctccatggctgcctcagggtgcatctacctcaccctg
ctcttcctcattgagaccaacctgctgtggagactgaggaccttcatctgtgccttccag
aggaggtggactctggcagaattgcagaaccggacatcagtgcttcctgaggaccaagat
gtagctgacgagaggagccgcgtcctggtccccagcttggactccatgcttgacacacca
ctcatcatcaatgagctctccaaggtgtatgaccagcgagcaccgctccttgccgtggac
aggatctcccttgcggtccagaaaggggagtgctttggcctgttaggtttcaatggagct
ggaaaaaccacaacgttcaaaatgctgactggggaggagaccatcacctcaggggatgcc
tttgttgggggttacagcatcagttccgatatcgggaaggtacggcagcggatgggctac
tgcccccagtttgatgcactgctagatcacatgactggcagggagatgctggtcatgtat
gcacggctccgaggcatcccagagcgcctcatcagtgcctgtgtggagaatactctgcgg
ggtctgctcctagagccgcatgccaacaaactagtcaagacttacagtggcggtaacaaa
cgcaagctgagcaccggcattgccctcatcggagagcctgcagtcatcttcttagatgaa
ccatccactggcatggaccctgtggcccggcgcctgctgtgggacactgtggcccgggcc
cgggagtctggcaaggccattgtcatcacctcccacagtatggaggagtgtgaagcctta
tgtacccggctggccatcatggttcagggccagttcaagtgcctgggcagcccacaacac
ctcaagagcaagtttggcagtggctactccctgcaggccaaggtccggagtgaagggaag
caagaagtactagaggagttcaaggcatttgtggacctgaccttcccaggcagcatccta
gaagatgagcaccaagacatggtccactatcatttgcctggctgtgacctcagctgggcc
aaggtgtttggtatcctggagaaagccaaggagaagtatggagtggacgattactctgtg
agccagatctcactggagcaagtctttctgagctttgcccacctgcagccccccaccact
gaggatgggcgatga
DBGET
integrated database retrieval system
