Peromyscus leucopus (white-footed mouse): 114680761
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Entry
114680761 CDS
T07241
Symbol
Pcbp1
Name
(RefSeq) poly(rC)-binding protein 1
KO
K12889
poly(rC)-binding protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03040
Spliceosome
pleu04216
Ferroptosis
pleu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114680761 (Pcbp1)
09140 Cellular Processes
09143 Cell growth and death
04216 Ferroptosis
114680761 (Pcbp1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
114680761 (Pcbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114680761 (Pcbp1)
03041 Spliceosome [BR:
pleu03041
]
114680761 (Pcbp1)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114680761 (Pcbp1)
Spliceosome [BR:
pleu03041
]
Common components
Common spliceosomal components
hnRNP proteins
114680761 (Pcbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_PNO1_2nd
KH_NusA_1st
KH_NusA_2nd
MOEP19
Bac_chlorC
Motif
Other DBs
NCBI-GeneID:
114680761
NCBI-ProteinID:
XP_028709749
LinkDB
All DBs
Position
3:103236309..103237999
Genome browser
AA seq
356 aa
AA seq
DB search
MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT
LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI
KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT
IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ
VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGA
NINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggacgccggtgtgaccgaaagcggactcaacgtgactctcaccattcggctgctgatg
cacggaaaggaagtaggcagcatcatcgggaagaaaggggagtcggtgaagaggatccgc
gaggagagcggcgcgcggatcaacatctcggaggggaactgcccggagagaatcatcacg
ctgaccgggcccaccaatgccatctttaaggccttcgccatgatcatcgacaagctggag
gaagatatcaacagctccatgaccaacagtacggcggccagccggcccccggtcaccctc
cggctggtggtgcccgccacccagtgtggctccctgatcggcaagggcggctgcaagatc
aaggagatccgcgagagcaccggggcccaggtccaggtggcgggggatatgctgcccaac
tcgaccgagcgggccatcactatcgccggcgtgccgcagtcggtcaccgagtgtgtcaag
cagatctgcctggtcatgctggagacgctctcccagtctccgcaagggagagtcatgacc
atcccgtaccagcccatgccggccagctcgccagtcatctgcgcgggcggccaagatcgc
tgcagcgacgcggcgggctacccccacgccacccacgacctggagggaccacctctagac
gcctactcgattcaaggacaacacaccatttctccgctcgatctggccaagctgaaccag
gtggcaagacaacagtctcactttgccatgatgcacggcgggacgggattcgccggaatt
gactccagctctccagaggtgaaaggctattgggcaagtttggatgcatctactcaaacc
acccatgaactcaccattccaaataacttaatcggctgcataatcgggcgccaaggcgcc
aacatcaatgagatccgccagatgtccggggcccagatcaaaattgccaacccggtggaa
ggctcttctggaaggcaggtcactatcactggctcggctgccagtattagcctggcccag
tatctaatcaatgccaggctttcctctgagaagggcatggggtgcagctag
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