Peromyscus leucopus (white-footed mouse): 114680778
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Entry
114680778 CDS
T07241
Symbol
Thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114680778 (Thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114680778 (Thoc6)
03041 Spliceosome [BR:
pleu03041
]
114680778 (Thoc6)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114680778 (Thoc6)
Spliceosome [BR:
pleu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114680778 (Thoc6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
NBCH_WD40
WDR54
Beta-prop_CAF1B_HIR1
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
Phage_zn_bind_6
Motif
Other DBs
NCBI-GeneID:
114680778
NCBI-ProteinID:
XP_028709770
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All DBs
Position
8b:complement(2212987..2218597)
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AA seq
341 aa
AA seq
DB search
MEHATPSPMPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPMVTFHAHDGPVYSMVSTDRHLLSAGDGEVKGWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRDRS
PEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTASGNSCRVDVFTNLGYRAFSMSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgccacaccgtcgccgatgcctctgggtcaggctgaggtatttcaggccctg
cagcgactccacatgaccatcttttcccagagtgtctcgccctgtgggaagtttctggca
gctggcaacaattatgggcagattgccatcttcagtttatctgctgccttaagttcagag
gccaaagaagaaagcaaaaaacccatggtgaccttccatgcccatgacgggcctgtctac
agcatggtctctacagatcgacatctgctcagcgctggggatggggaagtgaagggctgg
ctttgggcagaaatcctcaagaagggctgtaaggaactgtggcgtcgtcagcctccatac
aggaccagcctggaagtccctgaaatcaatgccttgctgcttgtccccaaggagaattca
ctcattctagctgggggagattgtcagctgcacactatggacctggaaactgggaccttc
acacgggccctccggggccacacagactatatccattgcctggcactcagggatcgcagc
cctgaggtgctgtccggtggtgaggatggagctgtacggctttgggatctccgtatagcc
aaagaggttcagaccattgaagtctataagcatgaggagtgctcaaggccccacaatggg
cgctggattggatgtctggctactgactcagactggatggtctgtggagggggcccagcg
ctcaccctctggcacctcaggtcttccacgcccaccactgtctttcccattcgggcacca
cagaagcatgtcaccttctaccaggacctgatcctatctgctggccagggctgttgtgtc
aaccactggcagctgagtggggagcttaaggcccaggtgcctggttcctccccagggctg
ctcagccttagtctcaaccagcagccagcagccccagagtgcaaggtcctgactgcttca
ggcaacagctgtcgagtggatgtcttcaccaacctgggctaccgagctttctccatgtcc
ttctga
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integrated database retrieval system
