Peromyscus leucopus (white-footed mouse): 114680787
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Entry
114680787 CDS
T07241
Symbol
Tia1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114680787 (Tia1)
03041 Spliceosome [BR:
pleu03041
]
114680787 (Tia1)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114680787 (Tia1)
Spliceosome [BR:
pleu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114680787 (Tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
DbpA
Calcipressin
DUF1866
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
114680787
NCBI-ProteinID:
XP_028709787
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All DBs
Position
3:complement(103336199..103372264)
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AA seq
387 aa
AA seq
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MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYEEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQQNQ
IGYPPAYGQWGQWYGNAQQIGQYVPNGWQVPAYGMYGQPWSQQGFNQTQSSAPWMGPNYS
VPPPQGQNGSMLPNQPAGYRVAGYETQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagactctatacgtcggtaacctttcccgagatgtgacagaa
gctctcatcctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacggcagggaatgacccatactgttttgtggagtttcatgagcatcgtcatgcagct
gcagcgctggctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaacccccagcagtcaaaagaaagatacaagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtgtttgttggtgacctcagtccagaaatcacaactgaa
gacatcaaagcagcttttgcaccattcggaagaatttcagatgctcgcgtggtaaaagac
atggctacagggaagtctaagggatacggctttgtctcctttttcaacaaatgggatgca
gaaaatgccattcagcagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaacccgaaagcctccagctccaaagagtacatatgagtcaaacaccaagcagctg
tcgtacgaggaggttgtcagtcagtccagccccagcaactgcaccgtgtactgtggaggg
gtgacgtcgggactgacagaacaactaatgcgtcagactttttctccatttggacaaata
atggaaattcgagtcttcccagataaaggatattcatttgttcggttcaattcccatgaa
agtgcagcacatgcgattgtttctgttaatggtaccaccattgaagggcatgtggtgaaa
tgctattggggcaaagagactcttgatatgataaatcccgtgcaacagcagcaaaatcaa
attggatatccaccagcatatggccagtggggccagtggtatggaaatgcacaacagatt
ggccagtatgtgcctaatggttggcaagtacctgcctatggaatgtatggccagccgtgg
agccagcagggattcaatcagacccagtcttctgcaccatggatgggacccaattacagt
gtgccgccacctcaaggccaaaatggcagcatgcttcctaatcagcctgctgggtatcga
gtggcagggtatgaaacccagtga
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