Peromyscus leucopus (white-footed mouse): 114680889
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Entry
114680889 CDS
T07241
Symbol
Scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114680889 (Scaf8)
03041 Spliceosome [BR:
pleu03041
]
114680889 (Scaf8)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114680889 (Scaf8)
Spliceosome [BR:
pleu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114680889 (Scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF3525
Motif
Other DBs
NCBI-GeneID:
114680889
NCBI-ProteinID:
XP_037056319
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All DBs
Position
8a:45329165..45485843
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AA seq
1137 aa
AA seq
DB search
MAAGIPPPVVTPVLAGTTAAMSNTPGTPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQ
ILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQLTAAAAAANSLTPL
DQGVSFNKKLMDRFDFGEDSEHSEESKKEIPTPQLSHVSESVNNSIFHQIAEQLQQQNLE
HLRQQLLEQQQQPQKVTPQDSQEGTFGSEHSASPSQGSSQQHFLEPEANLDDSIDIQQQD
MDIDEGQDVVEEEIFEPEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSR
SRSRERKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTLWVGQVDKKATQQD
LTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFRALQKLSSGSYKIGSKVIKIAWALNK
GVKTEYKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGMIDQETVNAEWETVKTSEPVKETV
QTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPAVSLVPPAFPVSMPVPPPGFSP
IPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPPLSMTPETVKDVGF
GSLVLPGGSVASGLAPSTLSAGNVFNPPNKAEPEEKVPHLTEHQIPSGENTRPVIPNDIP
SSAAMLAQPPGPANTSGILCVQRPNVSSNSEILGVRPANVSSNAAIIGAQPPNILNNSGI
LGIQPPNVSSGSGLLGVLPPNLPNNSGLVGLQPPNVTNPAGLLGTQPPIGPQNLPPLTIP
AQRMPALPMLDIRPGLIPQAPGPRFPLLQPGIPPQRGIPPPSVLDAALHPPPRGPFPPGD
LFSQPERPFLAPGRPSIDNVPNPDKRIPLGNDSIQQEGDRDYRFPPVETREGMNRPPPVD
VRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGLDHLGRRDHFGFPPEKPWG
HRDFDEREHRVLPVFGGPKGLHEERGRFRAGSYRFDPRSGPWNRGFAQEVHRDFDDRRRP
WERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHARVFDYFEGATSQRKGDNVPQVN
GENTERHAQPPPLPVQKDPELYDKLASSGDVDKEESGTVADVESEAVVVESTETEGT
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagggattccccccccagttgtcaccccagttttggctggcaccactgcagcg
atgagcaatactccaggaacccctgtgacacctgttactccagccaatgtggtccaaggc
ttacctgatccatgggtgtctcagataacaaacacagacacactggcagccgttgctcag
atcttacagagtcctcaaggtcagcagcttcagcagctcatacaaaccttacagatacaa
cagcagaagccccagccttccatcctgcaggccttggatgctggtctagtggttcagttg
caggcactcacagcacagcttacagctgcagccgcagcagccaactcccttacacccttg
gatcagggagtctctttcaacaagaagttgatggataggtttgattttggggaagattct
gagcacagcgaagaatccaaaaaggaaattcctactcctcaactttctcatgtttccgaa
tctgtgaacaactccatcttccatcagattgcagagcagctgcagcagcagaacctggag
cacctgcgacagcagctcttggagcagcagcagcagcctcagaaggtaactcctcaagat
agccaggagggaacatttgggtcagagcactcagcgtcaccctcacaaggaagtagccag
cagcattttctggaacctgaagcaaatttagatgattccatagacattcagcaacaggat
atggatattgatgaaggacaagatgttgttgaagaggagatctttgaaccagaagctaag
aaagtagctgttcgctcaagatcaagaactcattcgcgatctcgatcaagatcaccaaga
aaacgaaggtccaggtcacgatctgggtcgagaaagcgaaaacataggaagcgatcccgc
tcccgttctagagagagaaagagaaaatcatcacgatcatattcaagtgaaagaagagcc
agagaaagggagaaagaacgccaaaaaaagggactgcctcctgtcagatcaaaaactcta
agtgtgtgcagcactactctctgggttggccaagtggataagaaggctacacagcaagat
ctaaccaacctctttgaggagtttggacaaattgaatctattaatatgattccacccagg
ggctgtgcatatgtctgtatggttcatcgacaagattcttttcgggctcttcagaaactg
agttcaggatcctataaaattggttccaaggtcattaagattgcctgggctttgaacaaa
ggtgtaaagacggaatataaacagttctgggatgtggatcttggagtcacatatatacct
tgggaaaaagttaaagtggatgacttggatggctttgcagaaggaggcatgatagaccag
gaaactgtaaatgctgaatgggaaactgtgaaaacctcagaacccgttaaagagacggtc
cagactacacagagtccaactccagttgaaaaggagacagtggttacaacacaggcagag
gtcttccctccgcctgtggccatgctgcagattccagtagctccagcggttcctgcagtt
agtctagttccaccagcgtttcctgtgtcgatgccggtcccacctcctggattcagccca
attcctcctcctccttttctccgagcaagttttaacccttcacaaccacctcctggtttt
atgccacctccggttcccccacctgttgtacctccccctgcaattcctccagtagtacca
acatctttagtgcaaccaccattgtccatgaccccagaaactgtgaaagatgttggattt
ggtagccttgttttaccaggtggttctgtggccagcggtctcgctccttcaactctatca
gctggaaatgtttttaatcctcccaataaagcagagcctgaagaaaaagtacctcacctt
acagaacaccagattccttctggtgaaaacaccagaccagtgattccaaatgatattcca
agtagtgctgcaatgttagcacagccgcctggccccgcaaacacctctgggatcctgtgt
gtgcagagaccaaatgtgtcaagtaattctgaaattctgggggttcggccagctaatgtt
tccagtaatgctgcgattattggagcccagccaccaaatattctaaataactctggaatt
ttgggcatacagccaccaaatgtgtcgagtggctctggacttcttggggtactgcctcca
aacttgcctaacaactctggacttgtaggactacagccaccaaatgttacaaatcctgct
ggacttttgggaacacagccaccaattggacctcaaaacttacctcccttaactatccca
gcccaaaggatgcctgcattgccaatgttagacatccgtccaggactgataccacaggct
cctggaccaagattccctttactacagcctggaatccccccccaacgtgggatccctccc
ccatcggtacttgatgcagctcttcacccgcctccccgtggaccttttcctcctggagat
ctttttagtcagccagaaagaccttttctggctcctggaagaccaagtatagacaatgtt
cccaacccagataaacgaataccacttgggaatgacagtattcagcaggaaggggataga
gattaccggtttcctcctgtagaaacaagggagggcatgaatagacctcccccggtggat
gttagggatgtggttgggcgacctatagatccccgagaaggccctggaaggcctccatta
gatggtagggatcattttggaagacctcctgtggacatcagagagaatcttgtgaggcca
ggtctagatcatcttggtcgaagagaccactttggctttcccccagagaagccttggggg
catagagattttgatgagagagagcatcgagttctgcctgtctttggtggtccaaaaggc
ttacatgaagaaagaggtagatttcgggctggaagttaccgatttgatcctagaagtggt
ccttggaacagaggatttgcgcaagaagttcacagagattttgatgaccgcagaagaccc
tgggagaggcaaagggatagggatgacagagattttgatttctgcagagaaattaatgga
aatcgtcttggacgagatagaattcaaaacacttgggtcccccctcctcatgctcgggtg
tttgattatttcgaaggggccacttctcaacgaaaaggtgataatgtgcctcaagttaac
ggtgaaaatacagagaggcatgctcagccaccgcctttaccagtccagaaggaccctgaa
ctctatgacaaactggcgtcttcaggtgacgtagacaaggaggagagcggcacagttgct
gatgtagaaagtgaagcagtggtggtagagagcacagagactgaggggacataa
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