Peromyscus leucopus (white-footed mouse): 114681027
Help
Entry
114681027 CDS
T07241
Symbol
Polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03020
RNA polymerase
pleu03420
Nucleotide excision repair
pleu05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114681027 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
114681027 (Polr2b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
114681027 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114681027 (Polr2b)
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114681027 (Polr2b)
Enzymes [BR:
pleu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114681027 (Polr2b)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114681027 (Polr2b)
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114681027 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
114681027
NCBI-ProteinID:
XP_028710115
LinkDB
All DBs
Position
10:64252297..64295954
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgccgacgaggatatgcaatatgatgaggatgatgatgaaatcactccagat
ttgtggcaagaagcgtgctggatcgtgatcagttcttactttgatgaaaaaggcttggtc
agacaacagttggattccttcgatgagtttattcagatgtctgttcaaagaattgtggag
gatgccccgcccattgacctgcaggctgaagctcagcacgccagtggagaggttgaagag
ccgccaagatatttactgaaatttgagcaaatttacctctccaaacctactcattgggaa
agagatggtgccccttcaccaatgatgccgaatgaagccaggttgagaaatctcacgtac
tcggccccgctttatgttgacataaccaagacggtcattaaagagggcgaggagcagctg
cagacccagcaccagaaaaccttcatagggaagatcccaatcatgctgcgctccacctac
tgcctgctgaatggcctaacagaccgtgacctgtgtgagctgaacgagtgtcctctggat
cccgggggctacttcattattaatggatcagaaaaggttctgatagctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattccaaatacgcctacacaggagaa
tgtcgatcatgtctggagaattcttcccgacccaccagtaccatatgggttagcatgctg
gcgagaggaggacagggtgcgaagaagagtgctattggccagcgcattgtggcaacttta
ccatacatcaagcaggaagttcccatcataattgtgttcagagcactaggctttgtgtct
gatagagatattttagaacatatcatttatgactttgaagacccagagatgatggaaatg
gttaaaccatctctcgatgaagcgtttgtcatccaagaacagaatgtcgccttaaacttc
attggttcaagaggggcaaagcctggtgttaccaaggagaaaagaattaaatatgcaaaa
gaagtcttacagaaggaaatgctgcctcacgttggcgtcagtgatttctgtgagaccaag
aaagcctatttcttggggtatatggttcataggttacttctagcagctttgggtagaaga
gaactagacgacagagatcactatggaaacaaaagattggatcttgctgggcctctacta
gcattcttatttagaggaatgtttaagaatttgctgaaagaagtacggatctatgcacag
aagtttattgatcgtgggaaggactttaacttggagctggcaattaaaactagaatcata
tctgatgggctaaaatactctttagccactgggaactggggtgaccagaagaaagctcat
caagccagagctggcgtgtcccaggtattaaaccgtctgacttttgcatctactctttct
cacctgcgtcgtttaaattctcctattggtagagatggcaagctagcgaagccaagacag
ttgcataatacgttgtggggaatggtgtgtcctgctgagaccccagagggccatgctgtg
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcaaccttctcca
attttggaatttttagaagaatggagcatggagaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaacggctgctgggttggaatccacaaagatcct
gaacaactcatgaacacacttaggaagttacggcgtcagatggacatcattgtatctgaa
gtttctatgatcagagatattcgagagcgggagattcggatctatacagatgcaggccgt
atctgtagaccacttctgattgtagaaaaacaaaagctgctcttgaagaagagacacatt
gaccagctgaaagagagagaatataacaactacagttggcaggatctggtggccagtggg
gtagtagaatacattgataccctggaagaagaaacagtgatgcttgcaatgactccagat
gatttacaggagaaagaagtagcttattgttccacatacacccactgtgagattcaccca
tcaatgattcttggcgtctgtgcatctattattccttttcctgatcataaccagtctcct
aggaacacgtaccagtccgctatgggcaagcaggctatgggagtttatatcaccaacttc
catgttcggatggacaccttggcccatgttctctattatcctcagaaaccactggtgact
acgcggtctatggaatatctacgctttagagagctgccagcaggaatcaactcaattgtg
gctattgcatcatacacgggctataatcaagaagactctgttatcatgaatcgttcagcg
gtggatcgaggctttttcaggtctgttttctaccgatcatacaaagaacaggagtctaag
aaaggatttgatcaagaagaagtgtttgagaagcctacacgtgaaacatgccagggtatg
aggcatgccatttacgacaagttggatgatgatggtttgatagctccaggcgttcgtgta
tcaggggatgacgttatcataggcaaaacagtcaccttacctgaaaacgaggatgaactg
gagagcaccaaccgccggtacaccaagagagactgtagcactttcctcagaacgagtgag
acgggcatcgtggaccaagttatggtgactctcaaccaggaaggatataaattttgtaaa
ataagggtacgctctgttagaattccacagattggagacaaattcgccagccgacatggt
cagaagggtacttgtggtattcagtatagacaagaggatatgcccttcacctgtgaaggc
ataactccggatatcatcataaatccccatgctatcccctctcgaatgacgattggtcac
ttgattgaatgtcttcaagggaaggtctctgctaacaagggtgaaattggtgatgccact
ccctttaatgacgctgtcaatgtgcagaagatttctaatcttttatctgactatggctac
catctcagaggaaatgaggtactctacaatggattcactggtcgaaaaatcacatcacag
atttttattggccccacttactaccagcgtttgaagcatatggtggatgacaaaattcat
tctcgtgctaggggaccaattcagatccttaatagacagcccatggagggtagatctcgt
gatggcggcctgcgttttggagaaatggaacgagattgtcagattgcccacggtgctgca
cagttcttaagagagaggttgtttgaggcatcagatccgtatcaggttcacgtgtgtaat
ctttgtggaataatggcgattgctaacaccagaactcatacatatgaatgcaggggctgc
cggaacaaaacccagatatctttggttcgaatgccttatgcgtgcaaactgttgttccag
gagcttatgtccatgagcatcgcacctcgaatgatgagtgtgtag
DBGET
integrated database retrieval system
