KEGG   Peromyscus leucopus (white-footed mouse): 114681287
Entry
114681287         CDS       T07241                                 
Symbol
Wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    114681287 (Wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pleu03400]
    114681287 (Wdr48)
DNA repair and recombination proteins [BR:pleu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     114681287 (Wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IP5PC_F WDR54 Beta-prop_DCAF4 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 114681287
NCBI-ProteinID: XP_028710565
LinkDB
Position
7:108405970..108447442
AA seq 703 aa
MGLLPAHLPLLSAAFLRSGRHPAAEATRRPRVSYVIRDEVEKYNRNGVNALQLDPALNRL
FTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAH
KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLS
GNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQC
LSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPD
IRVLICEEKAPVLKMELDRSADPPPAIWIATTKSTVNKWTLKGIHNFRASGDYDNDCTNP
ITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFED
EIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGL
LLQALLEYWPRTHVTPMDEEENDVNHVSGEQESRVQKGNGYFQVPPHTPVIFGEAGGRTL
FRLLCRDSGGETEAMLLNETVPQWVIDITVDDKFLEVELLDQRKNMPKFNKIPFYLQPHA
SSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKPEQEKEEDIAVL
AEEKIELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgggcctactgccggctcacctgcctctgctctcggccgccttcctccggagcggccgc
cacccggcggcggaggccacgcggcgcccgcgggtttcctatgtgattcgagatgaagtg
gagaagtacaatcggaatggagtcaatgccctgcagctggacccagcgctcaacagactc
ttcacagcgggccgagactccatcataagaatatggagtgtcaaccagcacaagcaagac
ccatatatagcatctatggagcaccacacagactgggtgaacgatgtcgtgctctgctgc
aatgggaaaacgttaatatctgcttcctctgacacaacggtcaaagtatggaacgcacac
aaagggttctgcatgtccacactcaggacacataaggattatgtaaaggccttagcatat
gccaaggataaagagctggtagcatcggctgggttggacagacaaatattcctttgggat
gtgaatactctgacagcattgactgcctcaaataacactgtcacaacttcttctttaagt
gggaacaaagattctatttatagcctggccatgaaccaactgggaacaatcattgtatca
gggtccactgagaaggttctaagagtgtgggatccaagaacctgtgcaaaactcatgaag
ctgaaagggcacacggacaacgtgaaggctctgctgctgaacagggacggcacgcagtgc
ctctctgggagttcagatgggacgattcgcctgtggtcccttggccagcagagatgtata
gcaacataccgagtccacgatgaaggcgtttgggccctacaagtcaacgatgccttcacg
catgtatattctggaggaagggacaggaagatttactgcacagacctaagaaaccctgac
attcgggtgctgatttgtgaagaaaaagcaccagttctcaagatggagcttgacagatca
gcagatccccctcctgcaatctggattgcaacaacaaagtccacagtaaataagtggaca
ctgaaaggaattcataatttccgagcctctggtgattatgacaatgactgtacgaatccc
ataacacccctctgcacacagcccgaccaggttattaaaggcggcgctagtatcattcaa
tgccacatccttaatgataagagacatatattaaccaaagatacaaataacaatgtggcg
tattgggacgtgttgaaggcgtgcaaagtggaggatttgggcaaagtggactttgaagac
gaaattaagaaaagatttaaaatggtgtatgttccaaattggttctcagtagatctaaaa
acagggatgctgacgattactctggatgaaagtgactgctttgctgcctgggtttctgcg
aaagatgctggcttcagcagtcccgacgggtcagacccaaaattgaacttaggaggcctt
ctactgcaggcacttctggagtactggccgagaacacatgtgactcccatggatgaagaa
gagaatgacgtgaaccatgtgagtggggagcaggagagcagagtccagaagggaaatggg
tatttccaagtgcccccccacacccctgtgatctttggcgaagctggaggtcgcacactg
ttcaggctgctctgccgggattccgggggggagacggaggcgatgcttctcaatgagacg
gtaccacaatgggtaattgacatcactgtggatgataaattcctagaagtggaattgctg
gatcaaaggaaaaatatgcccaaattcaacaaaattcctttctacctccaacctcatgca
tcttcaggagcaaaaactttaaaaaaagacagactctctgccagtgacatgctgcaggtc
cggaaggtaatggaacatgtctatgagaagatcatcaacctggataatgagtctcaaacc
actagttcttctaataacgaaaagccagagcaggagaaggaggaggatattgccgtgttg
gcagaggagaaaattgaacttctgtgccaggaccaggttttggacccaaatatggacctt
cgaacagtaaagcacttcatatggaagagtggtggagacctgacactccattaccgtcag
aagtccacgtga

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