KEGG   Peromyscus leucopus (white-footed mouse): 114681894
Entry
114681894         CDS       T07241                                 
Symbol
Atxn2
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2
  KO
K23625  ataxin 2/2L
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu05014  Amyotrophic lateral sclerosis
pleu05017  Spinocerebellar ataxia
pleu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    114681894 (Atxn2)
   05017 Spinocerebellar ataxia
    114681894 (Atxn2)
   05022 Pathways of neurodegeneration - multiple diseases
    114681894 (Atxn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pleu03019]
    114681894 (Atxn2)
Messenger RNA biogenesis [BR:pleu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114681894 (Atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 114681894
NCBI-ProteinID: XP_028711493
LinkDB
Position
23:12937500..13035624
AA seq 1281 aa
MRPSAAATRRPSAGPEPPRRSGWAARRSLPRTARRGGRGGAATYPSAGPXPRGPGAPPRG
PRSPPCASDCFGSNGNGASRPGSRRLFGVCGPPRPFVVVLLPLAPATAPARACPLGVRAS
PPRSGVCSARPAPGCPRPACEPVYGPLTMSLKPQPQPPAPASGRKPGGGLLSSPGAAPAS
AASSSSSAVPAPAAPVASSSPAAGGGRPGLGRGRNSSKGLPQPTVSFDGIYANVRMVHIL
TSVVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKC
SDFVVVQFKDTDSSYARRDAFTDSAVSAKVNGEHKERDLEPWDAGELTASEELEALENDV
SNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSA
QYKARVALENDDRSEEEKYTAVQRNCSEREGHGPNTRENKYIPPGQRNREVISWGSGRQS
SPRMGQPGPGSMPSRAASHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPN
SLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTVPKRMSSEGPPRMSPKAQRHPR
SHRVSAGRGSMSSGLEFVSHNPPSEAAAPPVARTSPAGGTWSSVVSGVPRLSPKTHRPRS
PRQNSIGNTPSGPVLASPQAGIIPAEAVSMAVPAASPTPASPASNRALTPSIEAKESRLQ
DQRQNSPAGNKENIKASETSPSFSKAENKGMSPVVSEHRKQIDDLKKFKNDFRLQPSSTS
ESMDQLLSKSREGEKSRDLIKDKMEANAKDAFVDSSSSTCPSGSSKTNSPSISPSVLSNT
EHKRGPEVTSQGVQTSSPACKQEKDDREEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPS
TTPTSPRPQAQPSPSMVGHQQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVN
QAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLV
QHVPHYQSQHPHVYSPVIQGSARMMAPAAHAQPGLVSSSAAQFGAHEQTHAMYACPKLPY
NKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGNHPAPSPVQ
HHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQSSFPAAQQTVFTIHPSH
VQPAYTTPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVS
TTAHFPYMTHPSVQAHHQQQL
NT seq 3846 nt   +upstreamnt  +downstreamnt
atgcgcccgtcggccgccgccactcggcggccctcggcggggccggagccgccccgccgg
tcgggctgggccgcgcggcgctcgctcccgcggacggcgcggcgcggcgggcggggcggc
gcggcgacgtatccctccgccggccctnccccgcgcggccccggcgcccctccccgcggg
ccgcgctcgccgccctgcgcctcagactgttttggtagcaacggcaacggcgcgtcccgg
cccggctcccggcggctgttcggtgtctgcgggcctccccgccccttcgtcgtcgtcctg
ctgcccctggctcccgcgaccgcgccagcccgcgcctgcccgctgggcgtccgcgcgtcc
ccgccgcgctccggcgtttgctcagcgcgcccggctcccggctgtccccgcccggcgtgc
gagccggtgtatgggccgctcaccatgtcgctgaagccgcagccgcagccgcccgcgccc
gccagtggccgcaagcccggcggcggcctgctctcgtcgcccggcgccgcgccggcctcg
gccgcgtcgtcctcgtcttccgcggtgccggccccggccgcgccggtggcgtcttcctcg
ccggccgcgggcggcgggcgccccggcctgggcagaggtcggaacagtagcaaagggctg
cctcagcctacggtttcttttgatggaatctatgcaaacgtgaggatggttcatatactt
acatcagttgttggatcgaaatgtgaagtacaagtgaagaatggtggtgtctatgaagga
gtttttaaaacatacagtcctaagtgtgatttggtacttgatgctgcacatgagaaaagt
acagaatccagttcggggccaaaacgcgaagaaataatggagagtattttgttcaaatgc
tcagacttcgttgtagtacagtttaaagatacagactccagttacgcacgaagagatgct
tttaccgactctgctgtcagcgccaaagtgaatggtgagcacaaggagagggacctggaa
ccctgggatgcaggggagctcacagccagcgaggagctcgaggctctggagaatgacgtg
tctaatggatgggatcccaatgatatgtttcgatataatgaagagaactacggtgtagtg
tccacatacgatagcagtttatcttcatatacggttcccttagaaagggataactcagaa
gaatttctgaaacgggaggcaagggccaaccagttagcggaggagatcgaatccagtgct
cagtacaaagcccgtgtggcccttgagaatgacgaccggagcgaggaagaaaagtacacg
gcggtccagaggaactgcagtgagcgcgaggggcacggcccgaacaccagggaaaataaa
tatattcctcctggacaaagaaacagagaagtcatatcctggggaagtgggagacagagc
tcaccacggatgggccagcctggaccaggctccatgccatcaagagccgcttctcacact
tcagacttcaacccgaactctggttcagaccaaagagtagttaatggaggtgtcccctgg
ccatcgccctgcccatctccttcctctcgcccaccttctcgctaccagtcaggtcccaac
tctcttccacctcgggcagccacccctacacggccgccctccaggcccccctcgaggcca
tccagacccccgtctcacccctctgctcatggttctccagctcctgtctctactgtgcct
aaacgcatgtcttcagaaggccctccaaggatgtctccaaaggcacagcggcaccctcgc
agtcacagagtctccgcggggagaggctccatgtctagtggcctcgagtttgtatcccac
aaccccccaagtgaagcagctgctcctccagtggccaggaccagtcctgcagggggcacg
tggtcctcagtggtcagtggggttccaaggttatctccaaaaactcacaggcccaggtct
cccaggcagaacagtattggaaacactcccagtgggcctgtgcttgcttctccccaagct
ggcatcatccctgcggaggctgtgtccatggctgttcccgctgcgtctcccactcctgcc
agccctgcatccaacagagctctgaccccgtctattgaggctaaagagtccaggcttcaa
gatcagaggcagaactctcctgcagggaataaggaaaatattaaagcaagtgaaacatca
cctagcttttcaaaagctgaaaacaaaggtatgtcaccagttgtttctgaacatagaaaa
cagattgatgatttaaagaagtttaagaatgattttaggttacagccaagttctacatcc
gaatctatggatcaacttctaagcaaaagtagagagggagaaaagtcacgagatttgatc
aaagacaaaatggaagcaaatgctaaggatgccttcgttgacagcagcagcagcacctgt
cccagtggcagcagcaagaccaacagccctagcatctccccttctgtgctcagtaacaca
gagcacaagagggggcccgaggtcacgtcccagggggtgcagacttccagtccagcctgc
aaacaagagaaggatgaccgagaagagaaaaaagacgctgctgagcaagttaggaagtca
accttgaatcccaatgcaaaggagttcaacccacgttctttttctcagccaaagccttct
accaccccaacgtcacctcggccgcaggcgcagccgagcccgtcaatggttgggcaccag
cagccagctccagtgtacacccagcctgtttgtttcgcaccaaatatgatgtatccggtc
ccagtgagcccaggcgtgcagcctttatacccaatacctatgacgcccatgccggtgaac
caagccaagacatatagagcagtaccaaatatgccccaacagcggcaagaccagcatcat
caaagcaccatgatgcaccctgcctcagcggcaggcccccccattgtagccaccccaccc
gcttactccactcagtacgtcgcctacagccctcagcagtttcccaatcagcctctagtt
cagcatgtgccacattatcagtctcagcatccccacgtgtacagccctgtcatacagggc
agtgccagaatgatggctccagcagcacatgcacagcctggtttagtatcttcttcagca
gctcagttcggggctcatgagcagacgcatgccatgtatgcatgtcccaaattaccatac
aacaaggagacaagcccttctttctactttgccatttccacgggctcccttgctcagcag
tacgcgcatcctaatgccaccctgcatccacatacgccccatccacagccttcggccact
cccactggacagcaacaaagccagcatggtggaaatcatcctgcacccagtcctgttcag
caccatcagcaccaggccgcccaagctcttcatctggccagtccacagcagcagtcagcc
atttaccacgcggggctggcaccgaccccaccttccatgacgcctgcctctaatacacag
tctccacagagcagtttcccagcagcacaacagacagtcttcaccatccatccttctcat
gttcagccggcatacaccacccctccccacatggcccacgtacctcaggctcatgtacag
tcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatgacgacacag
ccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccattccagtctcg
acaacagcgcatttcccctatatgacgcacccttcagtacaagcccaccaccaacagcag
ttgtaa

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