Peromyscus leucopus (white-footed mouse): 114681908
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Entry
114681908 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114681908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pleu03041
]
114681908
Spliceosome [BR:
pleu03041
]
Complex C
Other components
Step II factors
114681908
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
WD_LRWD1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
114681908
NCBI-ProteinID:
XP_037054410
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Position
23:complement(12386814..12388092)
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AA seq
337 aa
AA seq
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MYDYQGGSYLCIPWDVGVNLRSSVSPEKCYLPQKQIHAWSGHTQGVNAVRLFPLSGHLML
SCSRDCKIKLWEVYGDQHCLRTFTGHSQAVRDICFNTAGTQFLSAAYDRYLKLWDTDTGQ
CILGFTNGKVPYCVKFNPKEDKQNLFVAGMSAQKIVQWDILSGEIVQEYDQHLGAVDTIV
FVDENHRFVSTSDDKSLRVWEWNIPVDFKCMAEPSRHSMPAVTLSPNGKWLAGQSMDNQI
FIFGAQNRFRLNRKKKCKGHMVAGYACQTDFSPDMSYVISGDGNGNLNIWDWKTTKLYGR
FKAHDEVCIGVVWHPHEASTVITCGWDGLIKLWDAWN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtatgactatcaaggcgggtcctacctgtgcataccttgggacgttggtgttaatctt
cgatcatctgtgtcacctgaaaaatgttatcttccccaaaaacaaattcatgcgtggtct
ggacacacacagggtgtcaatgcggtcaggctgtttcctctttctggacatttgatgctg
tcttgttccagggactgtaaaattaagctatgggaagtttatggagaccagcactgtctg
agaacatttactggtcacagtcaagccgtgagggacatctgcttcaacactgcaggaaca
cagttcctcagtgcggcctatgacaggtacttgaaactctgggacacggacacgggacag
tgtatattaggatttacaaacggaaaagtaccctattgtgtcaagttcaatcccaaagaa
gacaagcaaaatctctttgtggctgggatgtctgcacaaaagatcgtgcagtgggacatc
ctcagtggagagattgttcaggaatatgatcagcatttgggagccgttgacaccattgtt
tttgtggatgagaatcacagatttgtgagtacatctgatgataagagtctaagagtttgg
gaatggaatatccctgtggatttcaagtgcatggcagagcccagtaggcactcaatgccc
gcagtgactttgtctccaaatgggaaatggctagcaggccagtcaatggataaccaaatc
ttcatttttggagcacagaacagattcagattaaatagaaagaaaaaatgtaagggccat
atggtagcaggctacgcttgtcagacagacttctcaccagacatgagctatgtgatttca
ggagacggaaatggaaacttaaacatttgggactggaagaccaccaaactctatggtagg
tttaaagcccatgacgaagtgtgcataggtgtggtgtggcacccacatgaagcgtccacg
gtcatcacatgtggttgggatggcctcattaaattgtgggatgcatggaattag
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