Peromyscus leucopus (white-footed mouse): 114682080
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Entry
114682080 CDS
T07241
Symbol
Syvn1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04120
Ubiquitin mediated proteolysis
pleu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114682080 (Syvn1)
04120 Ubiquitin mediated proteolysis
114682080 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114682080 (Syvn1)
Enzymes [BR:
pleu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114682080 (Syvn1)
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114682080 (Syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
114682080
NCBI-ProteinID:
XP_028711720
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Position
1:complement(56095759..56101654)
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AA seq
613 aa
AA seq
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MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQAPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPSTSAAVSRPSGTA
ATTTAAGTSAPAPASGSAPGPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLT
PEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPTEE
TASPVVSAAPSTSVPSSEVPTPSPGPSPPVPEAEKPPAPESVGAAEELPXDGEPDAAELR
RRRLQKLESPVAH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtaatgatggcggccagcctggcgttgaccggggcagtggtggct
catgcctactacctcaaacaccagttctaccccactgtggtgtatctgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttcctcttgggcaaagtg
atgggcaaggtgttctttgggcagctgagggcggcggagatggagcaccttttggagcgg
tcctggtatgctgtcactgagacttgtttggccttcactgtgtttcgggatgacttcagt
cctcgctttgtggcgctctttactctccttctcttcctcaaatgttttcactggttggct
gaagaccgtgtggactttatggaacgcagccccaacatctcctggctctttcactgccgc
attgtctctcttatgttcctcctgggtatcctggacttcctcttcgtcagccacgcttat
catagcattctgacccggggggcttctgtgcagctggtgtttggctttgagtatgccatt
ctgatgaccatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agcgagaacccctgggacaataaggctgtatacatgctctacacggagctgttcacaggt
ttcatcaaagtcctgctgtacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccactctttgccattaggcccatgtacctggctatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgggccatccgcaacatgaacacactgtatccagacgccacc
cccgaggagcttcaggcaatggataatgtctgtatcatctgccgggaagaaatggtgaca
ggcgctaagagactgccctgcaaccacatcttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgtccgacctgccgtatggatgtcctgcgggcatcgttgccagcc
caggcaccaccaccccctgagcctgctgaccaaggaccaccccctgcgcctcatcctcca
ccactgctgccacagcctcccaactttccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggcccccaatgggcccctttccacctgtcccacctcccccaagctca
ggagaggctgcagctcctccgtccaccagtgcagctgtttctcggcccagtggaacagcc
gccaccaccacggctgctggtaccagtgctcctgccccagcatctggctctgcccctggc
ccagaggctggccctgctcctggcttccccttccctcctccttggatgggtatgcccctg
cccccaccttttgccttcccgccaatgcctgtgccccccgcgggctttgccggtctgacc
ccagaggagctacgggcgctggagggccatgagcggcaacacctggaggcccggctgcag
agtctgcgcaacatacacacgctgctggacgccgccatgctgcagatcaaccagtacctc
actgtgctggcctccttggggccccccaggccagctacttccgtcaaccccactgaagag
actgcctctccagtggtgtctgctgccccctccaccagcgtccccagctctgaggtccct
accccatccccaggaccctccccaccagtccctgaagctgaaaagcctccagctcctgag
tcagtgggcgctgcggaggagcttccgnaggatggagagcctgatgctgcagaactgcgc
cggcgtcgcctgcaaaagctggagtcccctgttgcccactga
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