Peromyscus leucopus (white-footed mouse): 114682091
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Entry
114682091 CDS
T07241
Symbol
Capn1
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04141
Protein processing in endoplasmic reticulum
pleu04210
Apoptosis
pleu04217
Necroptosis
pleu04218
Cellular senescence
pleu04382
Cornified envelope formation
pleu05010
Alzheimer disease
pleu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114682091 (Capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
114682091 (Capn1)
04217 Necroptosis
114682091 (Capn1)
04218 Cellular senescence
114682091 (Capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114682091 (Capn1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
114682091 (Capn1)
05022 Pathways of neurodegeneration - multiple diseases
114682091 (Capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pleu01002
]
114682091 (Capn1)
Enzymes [BR:
pleu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
114682091 (Capn1)
Peptidases and inhibitors [BR:
pleu01002
]
Cysteine peptidases
Family C2: calpain family
114682091 (Capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
114682091
NCBI-ProteinID:
XP_028711734
LinkDB
All DBs
Position
1:56144739..56169841
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AA seq
713 aa
AA seq
DB search
MAEEFITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYETLRARCLQSGVLFRDEA
FPPVAHSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNETILHRVVPYGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQCNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWFDLPKAPRDLFQIIQK
ALERGSLLGCSINITDIRDLEAITFKNLVRGHAYSVTDAKQVNYQGQQVSLIRMRNPWGE
VEWKGPWCDSSSEWNRVDPYEREQLRIKMEDGEFWMSFRDFLREFDRLEICNLTPDALKS
RTLRNWNTTLYEGSWRRGSTAGGCRNFPATFWVNPQFKIRLEEVDDENDYESRESGCSFL
LALMQKNRRRERRFGRDMETIGFAVYEVPREMVGQPVHLKRDFFLANSSRARSETFINLR
EVSNRIRLPPGEYVVXPSTFEPNKEGDFVLRFFSEKKAGTQELDDQIQANLPDEKVLSEE
EIDDTFKTLFSKLAGEDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDG
NGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLNKKLHELIIT
RYSEPDLAVDFDNFVCCLVRLETMFRFFKVLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagttcatcacacctgtgtactgcaccggggtatcagcccaagtgcaaaag
caacgggccaaggagctgggcctgggccgccatgaaaacgccatcaagtacctgggccag
gattatgaaactctgcgggcaagatgcctgcaaagtggggtcctcttccgagatgaggcc
tttcctccggtggctcacagcctgggcttcaaagaactgggtcccaattcctctaaaacc
tatggcatcaaatggaagcgtcctacggagctgctatcaaacccccaattcatcgtggat
ggagccacccgaacggacatctgccagggagccctgggggactgttggctcctggctgcc
attgcctccctcacgctcaatgagaccattctgcaccgagtggttccctacggccagagc
ttccaggatggatatgctggcatctttcacttccagctgtggcagtttggagagtgggtg
gacgtggtcgtggatgacttgctgcccaccaaggatgggaagttggtgttcgtgcactct
gcccagtgcaacgagttctggagtgccctgcttgagaaggcctatgccaaggtgaacggc
agctacgaggccctttcgggaggctgcacctcagaggcctttgaggactttactggtggg
gtcaccgagtggttcgatctgcccaaggcacccagagacctcttccagatcattcagaag
gccctggagcgaggctccttgctgggctgctccattaatataaccgatatccgggatttg
gaagctattacctttaagaacctggtgaggggccatgcatactctgtgacggatgccaag
caggtgaattaccagggccagcaggtgagcctaatccgaatgcggaacccctggggcgaa
gtggaatggaaaggaccctggtgtgatagctcctcagagtggaacagagtggacccctat
gaacgagagcagctgaggatcaagatggaggatggggagttctggatgtccttccgagac
ttcttacgtgagttcgacagactggagatctgcaacctcacgcctgatgccctgaagagc
aggacactccggaactggaataccacgctctacgagggcagctggcgccgggggagcacc
gctggaggctgccggaacttcccagctaccttctgggtgaacccccagttcaagatccgg
ttggaggaggtagacgatgaaaacgattatgagagtcgcgagtcgggctgcagcttcttg
ttggccctcatgcagaagaaccgccgccgggagcgtcgctttggccgggacatggagacc
attggtttcgcagtgtacgaggtcccacgggagatggtgggtcagcctgtacacctgaag
cgtgacttcttcctggccaactcttctcgggcacgctcagagaccttcatcaacctgcga
gaagtcagcaaccgcatccgcctgccgccgggggagtacgtggtangtccctccaccttc
gagcccaacaaggagggcgactttgtgctgcgtttcttctcagagaagaaggctgggacc
caggagctagatgaccagatccaggccaacctccctgatgagaaagtgctctccgaagag
gagatcgatgacaccttcaaaaccttgttcagcaagctggcaggagaggacatggagatc
agcgtcaaggagttgcagaccatcctgaacaggatcattagcaaacacaaagacctgcgg
accaatggcttcagcctggagtcctgccgcagcatggtgaacctcatggaccgtgatggc
aatgggaagctgggcctggtggaattcaacatcctgtggaaccgcatccgaaattacctt
accattttccggaagtttgacctggacaagtctggcagcatgagtgcttacgagatgagg
atggccatcgaggctgcaggcttcaagcttaacaagaagctgcatgaactcatcatcacc
cgctactcagagcctgacctggccgtggacttcgacaactttgtgtgttgcctcgtgcga
ctggagaccatgttccggtttttcaaagttctggacacagacctggatggtgttgtgacc
tttgatttatttaagtggttacagctgactatgtttgcctga
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