Peromyscus leucopus (white-footed mouse): 114682092
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Entry
114682092 CDS
T07241
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu00310
Lysine degradation
pleu00514
Other types of O-glycan biosynthesis
pleu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
114682092 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
114682092 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pleu01003
]
114682092 (Colgalt1)
Enzymes [BR:
pleu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
114682092 (Colgalt1)
Glycosyltransferases [BR:
pleu01003
]
O-Glycan biosynthesis
O-linked Gal type
114682092 (Colgalt1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
114682092
NCBI-ProteinID:
XP_028711735
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Position
17:54071307..54087277
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AA seq
618 aa
AA seq
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MAAFPGGSRALRPLLPLLPPLLLPLLLGGADGYFPEERWSPESPLQAPRVLIALLARNAA
PALPATLGALERLRHPRERTALWVATDHNSDNTSAILREWLVAVKGLYHSVEWRPAEEPS
AYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYIMFVDSDNLITNPDTLSLLIAEN
KTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRK
TASRSLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRAHSSLQDE
AESFMHVQLEVMVKHPPVQLSRFISAPSKTADKMGFDEVFMINLKRRRDRRERMLRALQE
QEIDCRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIWKEVV
DRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEKAVPRV
RNLVEADYSYWTLAYVISLQGARKLLGAKPLTKMLPVDEFLPVMFDKHPVSEYKTHFSPR
NLRAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNERVKTDWDRAKSQKMREQQALSREA
KNSDVLQSPLDSTARDEL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttccccggcgggtcccgcgcgctgcggccgctgctgccgctgctgccgccg
ctgctgctgccgctgctgctgggcggcgcggacggctacttccccgaggagcgctggagc
cccgagtccccgctgcaggcgccgcgcgtgctcatcgcgctgctggcgcggaacgcggcg
cccgcgctgccggccacgctgggcgccctggagcggctgcgccacccacgggagcgcacg
gcgttgtgggtggccaccgaccataactcggacaacacctcggccatacttcgagagtgg
ctggtggccgtgaagggcctgtaccactccgtggagtggcgaccggccgaggaaccgagc
gcctacccagatgaggagggccccaaacactggtcggactcccgctacgagcacgtcatg
aagttgcgacaagcggccctgaagtcggcccgggacatgtgggctgattacattatgttt
gtggacagcgacaatttgatcaccaaccctgacactctgagtcttctcatcgctgagaac
aagacggtggtggccccgatgctggactcccgcgcagcctactccaacttctggtgtggg
atgacgtcccagggctactacaaacgcacccctgcctacatccccatccgaaagcgggac
cgcaggggctgctttgcggtgcccatggtgcactccaccttcctcatcgacctgcggaag
accgcgtccaggagcctggccttctacccgccacaccccgactacacctggtcttttgat
gacatcatcgtctttgctttctcctgcaagcaggcagaggtgcagatgtacgtgtgcaac
aaggaggtgtacggcttcctgcccgtaccgctgcgtgcgcacagcagcctgcaggacgag
gcggagagcttcatgcacgtgcagctggaggtcatggtgaaacatccgccagtgcagctg
tcgcgattcatctcagcgcccagcaagactgcagacaagatgggctttgacgaggtcttc
atgatcaacctgaagcggaggcgagacaggcgagaacgcatgctgcgggccctgcaggag
caggagatcgactgccggctggtggaggctgtggacggcaaagccatgaacaccagccag
gtggaggccctgggcatccagatgctgcccggctatcgggacccttaccatgggcgacca
ctcaccaagggagagctgggctgcttcctcagtcactacaacatctggaaggaggtggta
gaccggggactacagaaatcactcgtgtttgaggacgatctgcgttttgagatcttcttc
aagagacgtctgatgaacctcatgcgggatgtggagcgcgaggggctggactgggacctc
atctatgtgggccggaagcgcatgcaggtcgagcaccctgaaaaggctgtgcctcgcgtg
aggaacctggtggaggctgattactcctactggacgctggcctacgtgatctccctgcag
ggagctcgcaaactgcttggtgccaagccgctgaccaaaatgctgcctgtcgacgagttc
ctgccggtcatgtttgacaagcacccggtgtcagagtataagactcacttctctccccgc
aacctgcgcgccttctccgtggagcctctcctcatctaccctacacactacacgggggac
gacgggtatgtcagcgacacagagacctcggttgtatggaacaacgagcgggttaagact
gactgggaccgagccaagtcccagaagatgcgcgagcagcaggccctgagccgcgaggcc
aagaactcagatgtgctgcagtcgccgctggacagcactgcccgtgacgagctctga
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