Peromyscus leucopus (white-footed mouse): 114682339
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Entry
114682339 CDS
T07241
Symbol
Six5
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114682339 (Six5)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
114682339 (Six5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
114682339
NCBI-ProteinID:
XP_028712013
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Position
1:complement(173054340..173058063)
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AA seq
724 aa
AA seq
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MATSPAEPSAGPTAGGEAAAATEEEEEEARQLLQTLQAAXGEAAAAAGAGEAAAADSGSP
SGPGSPRETAAEAPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVL
RARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYR
LRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSN
WFKNRRQRDRTGTGGGAPCKSESDGNPTTEDESSGSPEDLERGVAPVAAEGAPQSSIFLA
GATPPATCPASSSLLVNGSFLAASSPPAVLLNGSPVIINSLALGEASSLGPLLLTGGGGA
PPPQPSPQGASEAKTSLVLDPQTGEVRLEEAPSEAPETKGVQGAVPGAAGEEVPGTLPQV
VPGPPPASTFPLTPGAVPSVAAPQVVPLSPSSGYPTGLSPTSPLLNLPQVVPTSQVVTLP
QAVGPLQLLAAGPGSPVKVAATPGPTNVHLINSGVGVTALQLPSAATPGNFLLANPVSGS
PIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKQEPAITVSEGALPVTPGPGL
PEGHTLGPISTQPLPPAPAVTSATGLPFSPDSSGLLPGFPTPLPEGLMLSPAAVPVWPAG
LELSAGVEGLGTPATHTVLRLPDPDPQGLLLGATAGTEVDEGLEAEAKVLTQLQSVPVEE
PLEL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcgcctgcagagccgagcgcggggccgacggccgggggggaggcagcggcg
gcgaccgaggaggaggaggaggaagcgcgccagcttctgcagactctgcaggcggccnga
ggggaggcggcggcggcggccggggcgggcgaggcggcagcggcggactccgggtccccg
agcggcccggggtctccccgcgagaccgcggccgaggcgcccacgggcctccgcttctcg
cccgagcaggtggcgtgcgtgtgcgaggcgctgctgcaggctggccacgccggtcgcttg
agccgcttcctgggcgcgctgcccccggccgagcgcctacgtggcagcgatccggtgctg
cgcgcgagggccctagtggccttccagcggggtgaatacgccgagctctaccggctcctc
gagagccgccctttccccgccgcccaccacgccttcctgcaggacctctacctgcgcgcg
cgctaccacgaggccgagcgggcccgcggccgtgcgctgggcgcggtggacaaataccgg
ctgcgcaagaagttccctctgcccaagaccatctgggatggcgaggagaccgtctactgc
ttcaaggagcgctcgcgcgcggcgctcaaggcctgctaccgcggcaaccgctatcccacg
ccagacgagaagcgccgcctggccacgctcaccggcctctcgctcacacaggtcagcaac
tggttcaagaaccggcgacagcgcgaccggactgggaccggcggcggagcgccctgcaaa
agcgagtccgatgggaaccccactactgaggatgagtccagcggaagtcccgaagacctg
gagaggggtgtggcccccgtggctgctgagggcgccccccagagttctatcttcctagcg
ggggccacccctcctgcgacgtgccccgcctcctcctctctcctggtgaatgggagcttc
ctggcagccagcagccccccagcagtgctcctcaatggcagcccagtcatcatcaatagc
ctggccctaggagaggcctccagcctggggcccctgctgctcacaggaggagggggtgcc
cctccaccacagcccagcccccagggagccagtgaggccaagacttccctggtcctggac
cctcagacaggagaggttcggttggaggaggctccgtctgaggctcccgagaccaaaggg
gtccagggggctgttcctggggcagctggagaggaagtcccagggaccctgccccaggta
gtccccggccccccacctgcctccaccttccctctgaccccaggagccgttccctctgtg
gctgctcctcaggttgtacccctctccccctcgtctgggtacccaacaggcctgagcccc
acttccccactgctgaacttgccccaggtggtgcccacctcccaggtggtgaccctgcct
caggctgtggggccgctccagctgttggcagctgggccaggcagccccgtgaaagtggca
gctacaccggggcctaccaacgtgcacctgataaactccggtgtgggagtgaccgccctg
cagcttccctcggccgccaccccaggaaactttctcctggccaaccccgtgtccggcagc
cccatcgtcactggggtagctgtgcagcagggcaagatcatcctcactgccacctttccc
accagcatgctcgtctcccaggtccttccacctgcccccagcctagccctgcccctgaag
caagagccagccatcacagtgtctgaaggagccctcccagtgacccccggccccggcctc
ccagagggtcacactctagggccaatctctactcagccactgccacctgctcctgctgtc
acctctgccaccggcctgcctttctccccggactcctctggcctgctgcccggcttccca
acacccctgcccgagggtctgatgctgtcccctgcggctgtaccagtctggccagcaggg
ctggaactgagcgcaggggtagaggggctggggacaccggccacccacactgtgctgaga
ctgccagacccagacccccaggggctgctcctgggggccacagcagggactgaggttgat
gaggggctagaagctgaggccaaggtcctgacgcagctgcagtccgtgcctgtggaggag
cccttggaactgtga
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