Peromyscus leucopus (white-footed mouse): 114682570
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Entry
114682570 CDS
T07241
Symbol
Rai1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114682570 (Rai1)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
114682570 (Rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
114682570
NCBI-ProteinID:
XP_028712348
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All DBs
Position
8b:42892768..42957319
Genome browser
AA seq
1896 aa
AA seq
DB search
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYSPQPYTGYE
GGAGTPGTVATTAADKYHRGSKSLQGRPAFPGYVQDSSPYPGRYSGEEGLQTWGGPQPPP
PQPQPLPGAVSKYEENLMKKTVVPPNRQYPEQGPQLPFRTHSLHAPPPQPQQPLAYPKLQ
RQKPQNDLASPLPFPQGGHFPXHSQSFPASSTYAPAVQGGGQGAHSYKSCTAPSAQPHDR
PMSANASLAPGQRVQSLHAYQSGRLGYEQPQPPQALQGRHHTQETLHYQNLAKYQHYGQQ
GQGYCPPDTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPL
STGAFPTGITDHSHFMPLLNPSPTDAASSVDPQVSNCKPLQKEKLPDTLLSDLSLQSLTA
LTSQVENISNTVQQLLLSKAAMPQKKGLKSLVSRTPEQHKNQHCSPEGSGYSAEPAGTPL
SEPPSSTPQSTHAEPQDTDYLSGSEDPLERSFLYCSQARGSPARVNNNSKAKPESVSTCS
VTSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEA
IVEKADKAWAEASSLPKDNGKPPFSLGNHSTCLDTVAKTSWSQPGEPETLPEPLQLDKGG
SAKAFSPGLFEDPSVAFATADPKKTTSPLSFGTKPLLGAATPDPTTAAFDCFPDTTTASS
VDSANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKAPDSVGKADVHESPACLGFQEEH
AIGKPTAVVPGDFKQQEADGVKEEVGGLLQCPEVGKADQWLEDSRHCCSSTDFGDLPLLP
PPGRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLMCTKEEAEEVLDTKAGWAPQ
CHLSGEPAILLGPSVGAESKVQSWFESSLSHMKPGEDGPEMERAPGSSATSEGSLAPKPN
KPAVPEVPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRVPALPKDLLLPESCTGPPQGQ
AEGAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKR
VGKPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPSIPGKDQRSMVLRSRTKPQQVFH
GKRRRPSESRIPDCRAPKKLPANNHLPTAFKVSSGPQKEGRVSQRVKVPKPGTGSKLSDR
PLHTLKRKSAFMAPVPTKKRSLILRSNNGSGLDGREERAEGSPGLLRRMASPQRARPRGS
GEPPPPPPLDPPAACMGLATPSSLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLAC
RVAGAPPGTPRSPALPEKRSGGSPAGPEEGLGGMGPGQMLPAAPGADPLCRNAASRSLKG
KLLSKKLSSAADCPKAEAFVSPETLPSLGAARAPKKRSRKGRTGALGPSKGLLEKRPCPG
QTLILATHDRASSTQGGGEDSSSGGGKKPKTEELGLASQPPEGRPCQPQTRAQKQPGQAS
YSSYSKRKRLSRGRAKTTHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADS
RTPAFSPFVRVEKRDAFTTICTVVNSPGDEPKPHWKPASSAASSSSSASSSSSSEPAGTS
LTTFPGGSAPPPQQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGP
YYPEHCLPKKKPKLKEKVRXGGTFEEASLPPERTVKGLECAVSTTATAAATAVTTAAPTL
GRPSRPDGPADPAKQGSLRTSARGLSRRLQSCYCCDGQGDGGEEVVPADKSRKHECSKEA
PAEPGGDTQEHWVHEACAVWTSGVYLVAGKLFGLQEAVKVAVDMPCSSCHEAGATISCSY
KGCIHTYHYPCAGDTGCTFIEENFTLKCPKHKRQPL
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccgcagacc
tcacaggagacatcgcgcctggagaattacaggcagccaggtcaggctgggctcagctgt
gatcggcagcggctgctggccaaggactattacagcccccagccctacacaggctatgag
ggtggcgccggcacacctggcacagtggccacgacagctgcagacaagtaccaccgaggc
agcaagtccctgcaggggaggccggctttccccggctatgttcaagacagcagcccctac
ccagggcgctactctggcgaggagggtcttcagacctgggggggcccacagcccccacct
ccccaaccgcagcccctgccaggggcagtgagcaagtatgaggagaacttgatgaagaag
acggtggtgcccccaaacaggcagtaccctgagcagggcccccaacttcccttccggact
cacagcctgcatgcccccccaccacagcctcagcagcccctggcttaccccaaactccaa
aggcagaaaccccagaatgaccttgcctcccctctgcccttcccccagggtggccacttc
cccnagcattctcagtccttccccgcctcctccacctacgccccagcggtgcagggcggt
gggcagggggcccactcatacaagagctgcacagcaccgtccgcccagccccacgacagg
ccaatgagtgccaatgccagcctggccccaggacagcgggtccagagtcttcacgcctac
cagtcgggccgcctcggctatgagcagccgcagccgccgcaggcacttcaaggccggcac
cacacccaggaaactctccactaccagaacctcgccaagtaccaacactatggacagcaa
ggccagggctactgtccgccggacacagctgtcaggactccagagcagtattaccagacc
ttcagccctagctccagccactcccctgcacgttccgtggggcgctctccttcctatagc
tccaccccgtcaccactgatgcccaacctggagaacttcccctacagccagcagccgctt
agcactggggccttccccacaggcatcacagaccacagccactttatgcccctgctcaat
ccctcgccgacggatgccgccagttccgtggacccccaggtcagcaactgcaagcccctg
caaaaggagaagctccccgacaccttgctgtcggacctcagcctgcagagcctcacggca
ctcacctcacaggtggaaaacatctccaacacggtgcagcagctcctgctgtccaaagct
gccatgccccagaagaaagggctcaagagcctcgtgtcgaggactccggagcagcacaag
aaccagcactgtagccccgagggcagcggttactccgctgagccggcaggcacgccactg
tccgagccgcccagcagcaccccccagtccacgcatgccgagccacaggacactgactac
ctgagtggctccgaggaccctctcgagcgcagcttcctctactgcagccaggcccgcggc
agccccgccagggtcaacaacaactccaaggccaagcctgagtctgtgtccacctgttcg
gtgacctcacccgacgacatgtccaccaagtctgacgactctttccagagcctgcacagt
actctgcctctggacagcttctctaaatttgtggcaggcgagcgagactgcccacggctg
ctgctcagtgccctggcacaggaagatctggcctctgagatcctggggcttcaggaagcc
atcgttgagaaggctgacaaggcctgggctgaggcttccagcctgcccaaggacaatggc
aagccacccttctcactggggaaccacagcacttgcctagacactgtggccaagacgtca
tggtcacagccaggggaaccagagaccctgcctgagcccttgcagctggacaagggtgga
agcgccaaggccttcagcccggggctgtttgaagacccttccgtggccttcgccaccgct
gacccgaagaagaccaccagtcccctgtcctttggcaccaagcctctgcttggggctgcc
actccagaccccaccacggccgcatttgactgctttccagacacgaccactgccagctct
gtggacagtgccaacccctttgcctggccagaggagaatctgggtgacgcttgtcctcgc
tggggcctccaccctggtgagctcaccaagggcttggagcagggtgcgaaggccccggac
agtgtcggcaaagcggatgtacacgagagccctgcctgcttgggcttccaggaagagcac
gccatcgggaagcccacagcggtggtgcctggggacttcaagcagcaggaggcagacggg
gtgaaggaggaagtgggtgggttgctgcagtgccctgaggtgggcaaagctgaccagtgg
ctggaggacagccgccattgctgctcctccactgacttcggggacctgccgctgttgcca
ccgcctggccggaaggaggacctggaggccgaagaggagtactcctccctgtgtgagctg
ctggggagccccgagcagcggcccagcctgcaggacccactgtcccccaaggccccgctg
atgtgcaccaaggaggaagcagaggaggtgctggacaccaaggccggctgggccccccag
tgccacctctcgggggagcctgccatcctactgggcccctccgtgggtgccgaatcaaag
gtccagagctggtttgagtcttcactgtcacatatgaagccaggagaagatgggccagag
atggagagagccccaggtagttcggccacttcagaaggctccctggccccgaagcctaac
aagcctgctgtgcctgaggtgcccattgctaagaaagagcccgtgcccaggggtaaaagt
ttacggagccggcgggtccaccgggggctgcctgaggctgaagactccccgtgcagggta
ccagcacttcccaaagacctcttgctcccagagtcctgcacgggacccccccagggacag
gcagaaggggctggagccccaggccgggggctgtcagaagggctccccagaatgtgtact
cgctctcttacagctctgagtgagccccaaactcctggacccccgggcctgaccaccacg
cccacacctcctgacaaactgggcggcaaacagcgagccgccttcaagtctggcaagcgg
gtaggaaaaccatcccccaaggccgcatccagccccagcaaccctgcggccctgcctgtt
gcctcggacagcagccccatgggctccaagaccaaggagccagactctcccagcatccct
ggaaaggaccagcgttccatggtcctccggtctcgcaccaaaccccagcaggtcttccat
ggcaaacggcggcggccctcggagagccggatcccggactgccgtgcccccaagaagctc
cctgccaacaaccacttacccaccgcattcaaggtctccagtgggccccagaaggaaggc
cgggtgagccagcgggtcaaagtccccaagcccggtacagggagcaagctctcagatcgg
cctctccacacgctcaaaaggaagtcggcgttcatggctcccgtccccaccaaaaagcga
agcctcatcctgcgcagcaacaacggaagtggactggatgggagagaggaaagggccgag
ggctcccccggcctcctgaggaggatggcctcaccccagagggccaggcccagaggcagc
ggggagccgcccccacccccacccctggacccacctgctgcatgcatggggttggctaca
ccatcatccctgcccagcgctgtgaggaccaaggtgctgccaccccggaaggggcgtggc
ctcaagctggaggccatcgtacagaagatcacctcacctgggctcaagaaactcgcctgc
agagtggcaggggctcctcctgggacaccccggagcccagccctacctgagaaacgttcg
gggggcagcccggctgggccagaggagggcctgggaggaatgggccctgggcagatgctc
ccggcagcccccggagccgacccgttgtgcagaaatgcagccagcaggtccctaaaaggc
aaactcttgagtaagaaactgtcctctgctgctgactgtcccaaagctgaggccttcgtg
tccccggagaccctgccatccctaggggctgcccgggcaccgaagaaaaggagccggaaa
ggcaggaccggggccttgggaccctctaaaggcctgttggagaagcggccctgtcctggc
caaactctgatccttgctacccacgacagggccagcagcactcagggtggaggcgaggac
agctccagtggaggaggcaagaagccaaagacagaggagctgggcctggcctcccagccc
cctgaaggccggccctgccagccccagacaagggcacagaagcagccaggccaagccagc
tacagcagctactcaaagcggaagcgcctcagccgtggccgggctaagaccacccatgct
tcgccctgtaagggacgtgccacccggagacggcagcagcaggttctgcccctggatcct
gcagagcctgaaatccgactcaaatacatttcctcttgcaagcggctgagggcagacagc
cgcaccccagccttctcgccctttgtgcgggtggagaagcgagatgcgttcaccaccata
tgcacggtcgtcaactccccgggggacgagcccaagcctcactggaagccggcctcctct
gctgcctcctcctcctcctccgcctcctcctcctcctcctcagaaccagctgggacctct
ctaaccacattccctggaggctctgcgccgccgccgcagcagccgaggccctccctgccc
ctctcctccaccatgcatctggggcctgtggtgtccaaggccctgagtacctcttgcctt
gtctgctgcctctgccaaaacccggccaacttcaaggacctcggggacctctgtggcccc
tactaccccgaacactgcctccccaaaaagaaaccaaaactcaaggagaaggtgcggnct
ggaggcaccttcgaggaggcctctctgcctcccgagagaacagtcaaaggcctggaatgt
gcagtcagcaccacggccaccgccgccgccaccgccgtcaccaccgccgccccgaccctg
gggaggccgtcccggcctgatggcccagccgaccctgccaagcagggctccctgcgcacc
agtgcccggggcctgtccaggcggttgcagagttgctattgctgtgacggtcagggggac
gggggtgaggaggtggtcccagctgacaagagccgcaaacacgagtgcagcaaagaggcc
ccagcagaacctggtggggacacccaggaacactgggtgcacgaggcctgtgctgtgtgg
accagcggggtgtacctggtggccgggaagctctttgggctgcaggaggccgtgaaggta
gctgtggacatgccatgttccagctgtcatgaggccggggcaaccatctcgtgctcctat
aaaggatgcatccacacctaccactacccttgtgccggtgacacaggttgcacattcatt
gaggagaattttactttgaagtgccccaaacataagaggcagccgttgtaa
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