Peromyscus leucopus (white-footed mouse): 114682806
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Entry
114682806 CDS
T07241
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
114682806 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pleu04054
]
114682806 (Dhx58)
Enzymes [BR:
pleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114682806 (Dhx58)
Pattern recognition receptors [BR:
pleu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
114682806 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
NblA
At4g08330
CATASP
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114682806
NCBI-ProteinID:
XP_037057228
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All DBs
Position
8b:91821209..91831598
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AA seq
678 aa
AA seq
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MDLRPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDGGKVVVLVNRVHLV
NQHAEEFRRMLDNRWTMTTLSGDMGPRPGFGLMARSHDLLICTAELLQLALINPEEEEHV
ELTEFSLLVVDECHHTHKDSVYNIILSRYLEHKLQKAKRLPQVLGLTASPGTGGATKLPR
AIDHILQLCANLDAWRIMSPENCRSQLLEHNPKPCKQYDLCQRRKEDPFGDLLKKLMSQI
HQQLKMPELSQQFGTQTYEQQVVELSKEAAQAGLQQRRVYALHLRRYNEALLIHDTVRAR
DALDMLQDFYHGERTRKPQMLHAERWLLELFEGHKNELAQLAAQGPENPKLEKLEGILLK
QFGSPNHPRGIIFTRTRQSASSLLLWLWQQPGLQNMNIKAQMLIGAGNTSQSTHMTQKDQ
QEVIHQFRNGILNLLVATSVAEEGLDIAKCNVVVRYGLLTNEISMVQARGRARAGQSVYS
FVATEGSRELRRELTNEALEVLMEQAVTAVQKMDPKEFKAKIQELQLAALAKRAAREAQR
ESQQRQFPAERVRLLCINCMVAVGYGSDLRKVEGTHHVNVNPNFSVYYTISQKPVVINKV
FKDWRPGGTINCSNCGEIWGLQMIYKSVTLPVLKIRSMLLETPHGKIQAKKWSRVPFSVP
DFDILQDCTQSLSDLLLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcggccctaccagtgggaagtgatcttgcctgcgctggagggcaagaatata
attatatggttgcccacgggcgctgggaagacccgggcagctgcctttgtggccaagagg
catctagagacagtagacggtggcaaggtggtggtactggtcaacagggtgcacctggtg
aaccagcatgccgaggagttcaggcgcatgttggataatcgctggaccatgacaaccctg
agtggggacatgggaccacgacctggctttggcctgatggcccggagccatgacctgctc
atctgcacagcagagctgctgcagctggcactcatcaacccagaagaggaggaacacgtg
gagctcacagagttctcgctgcttgtggtggacgagtgtcaccacacccacaaggactcc
gtctacaacatcatcctgagccggtacctagagcataagctgcagaaggcaaagcgtctt
ccccaggtgctgggtctcacggcctccccaggcactggcggggccaccaagctcccaagg
gccattgaccacatcctccagctctgtgccaacttggatgcgtggcgcatcatgtcacca
gagaattgccgctctcagctgctggagcacaacccgaagccctgcaaacagtatgacctc
tgccaaaggcgcaaagaggacccttttggagacttgctaaaaaagcttatgagccaaatc
caccagcaactaaagatgcctgaactgagccagcaatttgggacccagacatacgagcag
caagtggtggagctgagcaaggaggcggcgcaggctgggctccagcagcgacgggtgtat
gcgctgcacctgcggcgctacaacgaggcgctgttgatccatgacaccgtccgtgctcgg
gacgctcttgacatgttgcaagacttctaccatggagagcgcaccaggaaaccccagatg
ctgcatgctgagcgctggctgctggagctgtttgagggccataagaatgagctggcccaa
ttagcagctcagggacctgagaatccgaagttggagaagctggaagggatcctgctgaag
caatttgggagtcccaaccaccctcggggcatcatcttcacccgaacccgccagagtgcc
tcctccctcctgctctggctttggcagcagcctggccttcagaatatgaatatcaaggcc
cagatgctgattggagcagggaataccagccagagcacacacatgacccagaaagaccaa
caagaagtgatccaccagttcaggaatggtatcctgaaccttctggtggccacaagtgtg
gccgaggaggggctggatatcgccaagtgcaatgtggtggtgcgctatgggctcctgacc
aacgagatctccatggtccaggcccggggccgcgctcgagctgggcagagcgtgtactcc
tttgtggcgacagagggcagtcgggagctgcggcgagagctgaccaatgaggctctggag
gtgctgatggagcaggcagtgactgcagtacagaagatggaccccaaagagttcaaggcc
aagatccaggagctgcagctggcagctctcgctaaacgagcagcacgcgaggcccagcgg
gagagccagcagaggcagttcccagcagagcgcgtgcgactcctctgcatcaactgcatg
gtggctgtgggctacgggagcgacctgcggaaggtggagggcacccaccacgtcaacgtg
aaccccaacttctcggtctactataccatctcccagaagcctgtggtcattaacaaggtc
ttcaaggactggaggccaggggggaccattaactgcagtaactgtggggagatctggggc
ttacagatgatctacaagtcagtgaccttgccagtgctgaaaatccgaagcatgctcctg
gagacccctcacgggaagatccaggccaaaaagtggtcccgggtccccttctcagtacct
gacttcgacatcctgcaggactgcacccagagcctgtctgatctcttgctggactga
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