Peromyscus leucopus (white-footed mouse): 114682865
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Entry
114682865 CDS
T07241
Symbol
Lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03018
RNA degradation
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114682865 (Lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
114682865 (Lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114682865 (Lsm4)
03041 Spliceosome [BR:
pleu03041
]
114682865 (Lsm4)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114682865 (Lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
114682865 (Lsm4)
Spliceosome [BR:
pleu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114682865 (Lsm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
114682865
NCBI-ProteinID:
XP_028712770
LinkDB
All DBs
Position
17:complement(54444031..54449013)
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVREEAAKGRGRGGPQQQKQQKGRGMGGAGRGVFGGRGRGGIP
GAGRGQPEKKPGRQAGKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccttgtccctgctgaagacggcgcagaatcaccccatgctggtggagctgaag
aacggcgagacctacaatgggcacctggtgagctgcgacaactggatgaacatcaacctc
cgagaggtgatctgcacgtccagggacggcgacaagttctggaggatgccggagtgctac
atccgtggcagcaccatcaagtacctgcgcatccctgatgagatcatcgacatggtgcgg
gaggaggccgccaaggggcgagggcgcgggggaccccagcagcagaagcagcagaaaggc
cgaggcatgggcggtgctggccgaggtgtgttcggtggccgcggccggggtggcatcccg
ggtgcgggccgtggtcagcccgagaagaaaccaggacggcaagcgggcaaacagtga
DBGET
integrated database retrieval system
