Peromyscus leucopus (white-footed mouse): 114682909
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Entry
114682909 CDS
T07241
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03030
DNA replication
pleu03410
Base excision repair
pleu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114682909 (Pole)
03410 Base excision repair
114682909 (Pole)
03420 Nucleotide excision repair
114682909 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pleu03032
]
114682909 (Pole)
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114682909 (Pole)
Enzymes [BR:
pleu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114682909 (Pole)
DNA replication proteins [BR:
pleu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
114682909 (Pole)
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
114682909 (Pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
114682909
NCBI-ProteinID:
XP_028712862
LinkDB
All DBs
Position
23:408070..461981
Genome browser
AA seq
2279 aa
AA seq
DB search
MVLRNSGRRHAEPGADGEGSRDDGPSSSVSALKRLERSQWTDKMDFRFGFERLKEPGERT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIATLENVPKEDLDLPNHLVGLKRSYIKLSFHTVEDLVKVRKEISPAVKKNREQ
DHTSDEYTAMLSSILQGGSVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRFRGNAFPVEITRRVDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAAHGLSMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVC
DQIKAKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHMTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEVGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKPKLTISYPGAMLNIM
VKEGFTNHQYQELTEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFVLEGKRQIVMAQA
SENNLSVCTPDIEDFGLTKPYHSAVPVATKRKRVWESQEESQDIALTVPWQEVLGQPPSL
GTTQEEWLVWLQFHKKKWQLQVQQRLARRKKQRLESTEDVPRLGAIREGPATGLGSFLRR
TARSILDLPWQIVQISETNQAGLFRLWAIIGSDLHCIKLSISRIFYVNQRVAKAEEGPSY
RKVNRALPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQL
GCVCVVNKQLVRHLSGWEAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHHSQGHKALFG
VFIPSQRRASVFVLDTVRSNQMPSLSALYSAEHSLLLEKVDPKLLPPPKHTFEVRAETNL
KTICRAIQRFLLAYKEERRGPTLIAVQSNWELCRLASEIPVLEEFPLVPVRVADKISYGV
LDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAVNTILQ
SHHINDMEGAGSMGISFDVIQQASLEDMVTGNQAANAPASYDETALCSSTFRILKSMVVG
WVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEFKRLGS
SVIYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPSN
YGGIKGKVPSSIHCGQQDSQEKEETKDEEDEEEDEEEEGMEESEVEDLLENNWNILQFLP
QAASCQSYFLMIVSAYIVAVYHSMKNELRHTVPGSTPVKRKGASQFSQEAKGAAGALPGM
VTFSQNYVANELTQSFFTITQKIQKKVTGSRNSTEPSEMFPVLPGSHLLLNNPALEFIKY
VCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSCNFCRDL
DLCKDSSFSQDGAILPQWLCSNCQAPYDSAAIESALVEVLQRKLMAFTLQDLVCLKCRGM
KETHMPVYCSCAGDFVLTIHTEVFMEQIRIFQNIAKHYSMSYLQETIEWLLQTSPLSNC
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcaggaactctggacgtaggcacgccgaaccgggcgcggacggcgaaggcagc
cgggatgatggtccctcttcctcagtctcagcgctcaagcgtctggaacgcagccagtgg
acagataagatggactttaggtttggttttgagaggctgaaagagcctggagaaaggacc
ggctggctcatcaacatgcaccctactgagattttagatgaagacaaacgcttagtcagt
gcagtggattactacttcattcaagatgatggaagcagatttaaggtggccttgccctat
aagccgtatttctacattgcaaccagaaagggttgtgagcgtgaagtttcatcttttcta
tccaagaagtttcagggtaaaattgcaacattagagaatgttcccaaagaagatctggac
ttgccaaatcacttggtcggcttgaagcggagttacatcaaactgtccttccacactgta
gaggaccttgtcaaagtgaggaaagagatctcccctgctgtgaaaaagaaccgggagcag
gaccataccagtgatgagtacacagcaatgctttccagtattctgcaaggaggcagtgta
attactgatgaagaggaaacctctaagaagatagctgaccagttggacaacatagtggac
atgcgggagtatgatgttccctaccacattcgcctctccattgatctcaaaatccatgtg
gctcattggtacaatgtcagatttcgaggaaatgcttttcctgtggaaatcacccgacga
gttgatcttgttgaacgacctgaccctgtggttttggcatttgacattgagacaaccaaa
ctgcctctcaaatttcctgatgctgaaacagaccagattatgatgatttcctatatgatt
gatggccagggctacctcatcactaacagggagattgtttcagaagatattgaagatttt
gagttcactcccaaaccagaatatgaagggcccttttgtgtcttcaatgaacccgatgag
gtccatttgatccagagatggtttgagcatgtccaggagaccaaacctactattatggtc
acctacaatggggatttttttgactggccatttgtggaggctagggcagcagcccatggc
ctgagcatgtaccaggagataggtttccagaaggacagccagggggaatataaagcatcc
cagtgcatccacatggactgcctcaggtgggtgaagagagacagctaccttcctgtgggc
agtcataatctcaaggcagctgccaaggccaaacttggctatgaccctgtagagctggac
cccgaggacatgtgtcgtatggccactgagcagcctcagactctggccacttactcagtg
tcagatgctgttgccacttactacctgtacatgaagtatgtccatcccttcatattcgcc
ctgtgcaccattattcccatggaacctgatgaggtgctgcggaaaggctctggaacactg
tgtgaagctttgttgatggtgcaagctttccacgccaacattatcttccccaataagcaa
gagcaggagttcaacaagctgacagatgatggccatgtgctggatgctgagacctacgtg
gggggccatgtggaagcactagagtctggtgtcttccgaagtgatatcccgtgccggttt
aagatgaatcctgcagcctttgatttcctgctacagcgagttgagaaaactatgcgccat
gccattgaagaagaagagaaggtgcctatggaacaagtcaccaactttcaagaggtgtgt
gatcagattaaggccaagctcacctccctaaaagatgttcctaacagaatagaatgccct
cttatctaccatctagatgttggggccatgtatcctaacataatccttacaaaccgcctg
cagccttctgccatagtggatgaggccacctgtgctgcctgtgacttcaataagcctgga
gcaaattgtcagaggaagatggcctggcagtggaggggagaattcatgccagcaagtcgc
agtgaataccatcgaatccagcatcagctggagtcagagaagtttcctcctttgttccca
gaggggccagcccgggcctttcacgagctgtcccgtgaggaacaggctaaatatgagaag
cggaggctggcagattattgccggaaagcctataagaagatccatatgaccaaggtagaa
gaacgtctgacaaccatctgccagcgggaaaactcattttatgtggacacagttcgagcc
tttcgagacaggcgctacgagttcaaagggctgcacaaggtatggaagaagaagctctca
gcagctgtagaggtgggtgatgcatcggaggtgaaacgctgcaagaacatggagatcctt
tatgattcactgcagctggctcacaagtgcatcctcaactccttctatggctatgtcatg
cgcaaaggggctcgctggtactccatggagatggctggtatcgtctgcttcacaggagcc
aacatcatcacccaggcaagagagctgattgagcagatcgggaggcccttagaactggac
acagatggaatatggtgtgtcctacccaatagttttcctgaaaattttgtcatcaagaca
accaatgtgaagaaacccaaactgaccatctcctatcctggtgccatgttgaacatcatg
gtcaaggaaggcttcaccaaccaccagtatcaggaactgacggagccttcctcgctcacc
tatgtcacccgctctgagaacagcatcttttttgaagttgatggaccataccttgctatg
atactcccagcctctaaggaagaaggcaagaaactgaagaagagatacgctgtatttaat
gaagatggttccttggctgaactgaaaggttttgaggtgaaacgccgaggggagttacag
ctgattaaaatattccagtcctcagtatttgaggccttcctcaagggcagcacactggag
gaagtgtatggctctgtggccaaggtggctgactactggctcgatgtgctctatagcaag
gctgctaacatgcctgattctgaattgtttgagctgatttctgagaaccgttccatgtct
cggaaactagaagattatggggagcagaagtctacatccatcagcacagcaaagcgcctg
gctgaatttttgggagaccaaatggtcaaggatgctggactaagctgtcgctatatcatc
tccagaaagccagagggatctcctgtcactgagagggccattccacttgccattttccaa
gcagagcctacagtgaggaaacattttctgaggaaatggctaaagagttcatcacttcaa
gactttgatattcgcacaattctggactgggactactacatagagaggctaggaagtgcc
atccagaaaatcatcactatccctgcagctctgcagcaggtgaagaacccagttccacgt
gtcaaacacccagactggctgcataaaaaattgctagaaaagaatgatgtctacaagcaa
aagaagatcagtgagctctttgtccttgaaggaaagagacagattgtgatggcacaggct
tcagaaaacaatctgagtgtctgcactccagacatcgaggactttggcctcacaaagcca
taccactctgcagtcccagttgctactaagaggaagcgagtctgggagagccaagaggag
tctcaggatattgcactaactgtgccctggcaagaggtcttggggcagcctccctccctc
ggaaccacccaagaagagtggttggtctggctccagttccacaagaaaaagtggcagcta
caggtccaacagcgcctggcccgcaggaagaagcaacgtctagagtcaacagaggatgtg
ccaaggcttggggctatccgagagggacctgccacggggctgggaagctttttgcgacgg
actgcccgaagtattctggatcttccatggcagattgtacagatcagtgagaccaaccag
gctggtctcttcaggctatgggccatcattggcagtgacttgcactgcatcaagctgagc
atctctcgaatattctatgtgaaccagcgggtagccaaagcagaggaaggaccttcatat
cgaaaggtgaatcgggctcttcctcgttccaacatggtctacaatctctatgagtattca
gtaccagaggacatgtaccaagaacacatcaacgagatcaacactgagttgtcagcacca
gacattgagggcgtgtatgagactcaggtcccgttgttattccgggcccttgtacagctg
ggctgtgtgtgtgtagtcaacaaacagctggtaaggcacctttcaggatgggaagctgaa
acctttgccctcgagcacctagaaatgcgttcactggctcagttcagctacttggaacca
gggagtatccgccacatctacctgtaccaccactcacagggccacaaggcactctttggt
gtctttatcccctctcagcgaagagcatctgtgtttgtattggatactgtgcgcagcaac
caaatgcccagcctcagtgccctgtactcagcagaacatagcctgctactggagaaggtg
gaccccaagctcctccctccccccaaacacacctttgaagttcgtgctgaaaccaacctg
aagacgatctgcagagctatccaacgcttcctgcttgcctataaggaagaacgccggggg
cccacactcatcgctgtccagtctaactgggagctgtgtagactggccagtgagattcct
gtcttagaggagttcccactggtgcctgtccgagtggctgacaagatcagctatggagtt
ctggactggcagcgccatggagcccgccgaatgatccggcactacctcaatttagacact
tgcctttcacaggcttttgaaatgagcaggtatttccacatccccgttgggaacctaccg
gaagacatttccacctttggctccgaccttttttttgcacgccacctccagcgccacaac
cacctgctttggctgtctcctacctctcggcctgacctgggcgggaaggaagctgatgac
aatcgccttgtcatggagtttgatgatcgagccactgtggaaatcaatagttctggctgt
tattccactgtgtgcgtggagttggacattcagaatctggcagtcaacaccatcctccag
tcccaccatatcaatgacatggagggggctggcagcatgggcatcagcttcgatgtgatt
cagcaggcctccctagaggacatggtcacaggcaatcaagctgccaatgccccagccagc
tatgatgagacagccctctgctctagcaccttcaggatcctgaagagcatggtagttggc
tgggtaaaggagatcacacagtaccacaatatctatgctgacaatcaggtaatgcacttc
taccgctggctccagtcaccatgttctctgctccatgacccagccttgcaccggacacta
cacaatatgatgaagaagctcttcttgcagctcattgctgagttcaagcggctggggtca
tcagtcatctatgccaacttcaatcgcatcatcctctgtacaaagaagcgccggatagag
gatgcccttgcctatgtggaatatatcaccaacagcatccattctaaagagatcttccat
tccctgacaatctctttctctcgatgctgggaatttcttctctggatggatccatccaac
tatggtggaatcaaaggaaaagttccatctagtattcactgtggacagcaagactcccag
gaaaaggaggaaaccaaggatgaggaagatgaggaagaggatgaggaggaagagggtatg
gaggaatctgaggttgaggacctactggagaacaactggaacattctgcagtttttgcca
caggcagcctcttgccagagctacttcctcatgattgtttcagcatacatcgtggctgtg
taccatagcatgaagaatgaattgagacacactgtcccaggcagtacccctgtgaagagg
aagggggctagccagttctcccaagaggctaaaggggcagctggagcccttcctggaatg
gtcaccttctctcaaaattatgtggcaaatgagctcactcagagcttcttcaccatcact
cagaaaattcagaagaaagtcacaggctctcggaactccactgagccctcagagatgttc
cctgtcctccctggttcacacttgctgctcaataatcctgctctggagttcatcaaatat
gtgtgcaaggtattgtccctggatacaaacatcacaaatcaggtgaataagctgaaccga
gacctacttcgcctggtagacgttggtgaattctctgaagaggcccagttcagagacccc
tgccactcctatgtgctccctgaggtgatttgccacagctgtaatttctgccgagacctg
gacctgtgcaaagattcctccttctctcaggatggggccatcctgcctcagtggctctgc
tccaattgtcaggccccctatgactcagctgccattgagtcagccttggtggaagtcctg
cagaggaaactgatggccttcacactacaggacctggtatgcctgaagtgccgtggtatg
aaagagacccatatgcctgtgtactgcagttgtgccggggactttgttctcaccatccac
actgaggtcttcatggaacagattagaatcttccagaatattgccaagcactacagtatg
tcatacctccaggagaccatagaatggctgctacaaacaagccctttatcaaactgttag
DBGET
integrated database retrieval system
