Peromyscus leucopus (white-footed mouse): 114682928
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Entry
114682928 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114682928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114682928
Enzymes [BR:
pleu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114682928
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
HECT type E3
114682928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
114682928
NCBI-ProteinID:
XP_028712882
LinkDB
All DBs
Position
13:complement(1592664..1710553)
Genome browser
AA seq
2047 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYIPPESRKSNFKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPNSAKKPRAFQHIESLSETSKPHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKS
VAAGSSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQRSSKSET
SKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGA
AEARRQEKMADPESNQETVNSSAARTDEAPQGAAASSSVAGAVGMTTSGESESDDSEMGR
LQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQASDESQQLQAVIEM
CQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVD
AIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNA
LAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQ
QVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFL
LCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGA
IWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTAR
AIQRKPNPLANTNTSGYSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAV
RHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLP
DIFSVYFRREGVMHQVKHLAESESLLTSPPKACTNGSGSLGSTTPASSGTATAATNASAD
LGSPXLQHSRDDSLDLSLKGDRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT
TQSPKSSFLASLNPKTWGRLSAQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWI
KEQAHKFVERYFSSENMDGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDV
SSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPVGHA
PLLALVHKMNNCLSQMEQFPVKVHDFPSGNGAGGRGSQALKFFNTHQLKCQLQRHPDCAN
VKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSG
NVRHRLQFYIGEHLLPYNMTVYQAVRQFSVQAEDERESTDDESNPLGRAGIWTKTHTIWY
KPVREDEESSKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTP
PENITFEDPSLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQD
PLVIMTGNIPTWLTELGKPGKTVPSINLXMLACPFFFPFDTRQMLFYVTAFDRDRAMQRL
LDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVG
TGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTA
KPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVV
ARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELK
KGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQL
LCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLP
VGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMRDKLLIAAREG
QQSFHLS
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagggatatatccctcctgagagtagaaaatctaattttaaggcacccaaagtgcaa
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttctgaaaggcag
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctaactctgcaaaaaagccccgagcatttcagcacatt
gagtctctctcagaaaccagtaagccacatagtaagtcaaagaagagacatttagatcag
gagcaacaactgaaatctgcacaattgccgtcaacaagcaaggctcacaccagaaagagt
gtggctgctggtagttcacggagtcagaaaagaaagaggacagagagttcttgtgtaaag
agtggttctgggtctgaatcaactggtgccgaagagagatctgcaaaacccaccaagctg
gcttcaaaatcggccacctcagccaaagctgggtgtagcaccatcaccgattcttcttct
gctgcctctacttcctcctcatcttcagctgtagcctcggcctcttctactgtaccacca
ggtgccagggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgttcagcatcc
agccctagtcccagaagaagtagcagggaaaaggaacagaggtcttctaagtcagagaca
tcaaaacctggaccttctggattacaggccaaattagcaagtttaagaaagtctaccaag
aagcgcagtgagtccccacctgctgagctccccagtttgaggaggagcacacgtcaaaag
accacgggctcctgtgctagtaccagtcggcgaggctctggcctgggcaagagaggagca
gctgaggcccggcggcaagagaaaatggcagaccctgaaagcaaccaggagacagtaaat
tcctcagctgcccggacagatgaagctccccaaggagccgcagcctctagttctgttgca
ggggctgttggcatgaccacctctggggagagtgaatcggatgattctgagatgggacga
ttacaagccctgttagaggccaggggtcttcctcctcacctgtttggtcctcttggtcct
cggatgtcacagcttttccatagaacaattggaagcggagctagttccaaggcccaacag
cttcttcaaggactacaagcgagtgatgagagtcaacagcttcaggcagtcattgaaatg
tgtcagctattggttatgggaaacgaagagactctaggagggtttcctgtgaagagtgtt
gttccagctttgataacattactgcagatggaacataattttgacattatgaatcatgct
tgccgagccttaacctatatgatggaagcactccctcggtcatctgctgttgtcgtagat
gctatccctgtcttcttagaaaagctgcaagttattcagtgtattgatgtggcagagcag
gccttaactgccttggagatgttgtcacggcgacacagtaaagccattttacaggcgggt
ggtttggcagattgcttgctgtatctagaattcttcagcataaatgcccaaagaaatgca
ctagcaattgcagctaattgctgccagagtatcacaccagatgagtttcattttgtggca
gattccctaccattgcttacccaaaggctaactcatcaggacaaaaagtcagtagaaagc
acttgcctttgttttgcacgtctagtggacaactttcaacacgaggagaatttactgcag
caggttgcttccaaagatctgcttacaaatgttcaacaactgttggtagtgactccacca
attttaagttctgggatgtttataatggtggttcgcatgttttctctgatgtgttccaac
tgcccaacattagctgttcaacttatgaaacaaaacattgcagaaacgcttcacttcctc
ctgtgtggtgcctctaatggaagttgtcaagagcagattgatcttgtgccacgaagtcct
caagaactgtatgaactgacatctctgatttgtgaacttatgccatgtttaccaaaagaa
ggcatttttgcagttgataccatgttgaagaagggaaatgcccagaacacagatggtgca
atttggcagtggcgggatgaccgaggtctctggcatccctataacaggattgacagccgg
atcattgaggcagcccatcaggtcggtgaggatgagataagcttgtccactctgggacga
gtttatactattgattttaattctatgcagcaaatcaatgaggacacgggaacagcacgt
gccattcagagaaaacctaaccccttagccaatactaacactagtggatattcagagtta
aagaaggatgatgctcgagcacagctaatgaaagaagacccggaactggctaagtctttc
attaagaccttatttggtgttctctatgaagtgtatagctcctcagcaggacctgcagtc
agacataagtgccttagagcaattcttaggataatttattttgctgatgctgaacttctg
aaggatgttctgaaaaatcatgctgtttcaagtcacattgcttccatgctatcaagccaa
gacctgaagatagtagttggagcacttcaaatggcagaaatcttaatgcaaaagttacct
gatatttttagtgtttacttcagaagagaaggtgtcatgcaccaagtaaaacatttagca
gaatctgagtctttgttgacaagtccaccaaaggcgtgcacaaatgggtcaggatccctg
gggtctacaacaccagccagcagtgggacagccacggctgcaaccaatgcttctgctgat
ctggggtcaccangtttgcagcatagcagagatgattctctggacctgagcctcaagggt
gatcgattgagtgacgttctcaagagaaaacgactgccaaaacgagggccaaggaggcct
aagtactcacctccaagagatgatgacaaagtagacaatcaagctaaaagccctaccact
actcagtcacctaaatcttccttcctggcaagcttgaatccaaaaacatggggaaggtta
agcgcacagtccaacagcaacaacattgagccagcacgaactgcgggagttagtggtctt
gccagggcagcctcaaaagacaccatatccaataacagagaaaaaattaaaggttggatt
aaggagcaggcacataaatttgttgagcgttattttagttctgagaatatggatggaagc
aaccctgccttgaatgtacttcagagactttgtgctgcaactgaacaactcaacctccag
gtggacggtggagctgagtgccttgtagaaatccgtagcatagtctctgagtcagatgtt
tcatcatttgaaattcaacatagtggatttgtgaaacagctgttgctgtatttgacatct
aaaagtgaaaaggatgctgtcagcagagagatccgattaaagcgattcctacatgtcttt
ttttcttctccacttcctggagaagagcccattggaagagtagaaccagtgggccatgcg
cctttattggcactagttcacaagatgaacaactgtctcagccaaatggaacaatttcca
gtcaaagtgcacgatttccctagtggaaatggggctggcggcagaggatcacaagcttta
aaatttttcaacacacatcagttaaaatgtcagttacaaagacacccagactgtgcaaat
gtgaagcagtggaaaggcgggcctgttaagattgatcccctggctctggtgcaagctatt
gaaagataccttgtggttagagggtatggaagagtaagagaagacgatgaagacagtgat
gatgatggatcagatgaggaaatagatgagtctctggctgctcagtttttaaattcagga
aatgtaaggcacaggctacagttttatattggagaacatttactaccatataacatgact
gtgtatcaggcagtgcggcagttcagtgtccaggctgaagatgaaagggaatctactgat
gatgagagcaatcctctgggaagagctggtatttggacaaagactcatacaatatggtac
aaacctgtgagagaggatgaagaaagcagtaaagattgtgttggtggcaaaagggggaga
gcccaaacagctccaacaaaaacttctcccagaaatgcaaagaagcacgatgagttatgg
catgatggagtgtgcccgtcagtagcaaatcctttagaagtttacctcattcccacacca
cctgaaaatatcacctttgaagacccatccttagatgtgatccttcttttaagagtttta
cacgccatcagtcgatactggtattacttgtatgataatgcgatgtgcaaggagattatt
ccaactagtgaatttattaacagtaagttaacagcaaaagcgaataggcagcttcaagat
cctctagtaatcatgacaggaaacatcccaacatggctcactgagctaggaaaacctggt
aagacagtcccttcgataaacttgtaaatgttagcatgcccatttttctttccttttgat
acccgacaaatgcttttttatgtaactgcatttgatcgggaccgggccatgcaacgatta
cttgataccaacccagaaatcaaccagtctgattcgcaagacagcagagttgcacctaga
ttggatagaaaaaagcgcactgtgaacagagaggagctgctaaaacaagctgagtccgtg
atgcaggaccttgggagttcacgggcaatgttagaaatccagtatgaaaatgaggttggt
acaggtcttgggccaacactggagttttatgcacttgtttctcaggaactacagagggct
gacttgggtctctggagaggtgaagaagtaactcttagcaatccaaaaggaagccaagaa
gggaccaagtatattcaaaacctccagggcctgtttgcgcttccctttggtaggacagct
aagccagctcatatcgcaaaggttaagatgaagtttcgcttcttaggaaaattaatggct
aaggctatcatggatttcagattggtggaccttccccttggcctgcccttttataagtgg
atgctgcggcaggaaacttcactgacatctcatgatttatttgacattgatccggttgta
gccagatcagtctatcacctagaagacattgtcagacagaagaagagactggagcaggat
aaatcccagaccaaagagagtctacagtatgcattagaaactcttacgatgaatggctgt
tcagtggaagatctaggactggatttcacactgccagggtttcccaacattgaactgaag
aaaggagggaaagatataccagtgactatccacaatttggaggaatacctaagattggtg
atattctgggcactaaatgaaggtgtttctaggcaatttgactcattcagagatggattt
gaatcagttttcccactcagtcatcttcagtacttctacccagaagaactggatcagctc
ctgtgtggcagtaaagcagacacttgggatgcaaaaacattgatggaatgctgcaggcct
gatcatggctatactcatgacagtcgagctgtgaagttcttgtttgagattctcagtagt
tttgataatgagcagcagaggttgtttctccagtttgtgacgggtagcccacgattgccg
gttggagggttccggagtttaaatccacctctgacaattgtgcggaagacatttgaatca
acagaaaacccagatgacttcttaccctctgtaatgacttgtgtgaactatcttaagttg
ccggactactcgagcattgagataatgcgtgataaactgttgatagcagcaagagaaggc
caacagtcgttccatctttcctga
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integrated database retrieval system
