Peromyscus leucopus (white-footed mouse): 114683218
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Entry
114683218 CDS
T07241
Symbol
Sema6c
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6C
KO
K06842
semaphorin 6
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
114683218 (Sema6c)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
114683218
NCBI-ProteinID:
XP_037062774
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Position
6:69550251..69560814
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AA seq
973 aa
AA seq
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MPPAPHSMPLLLLLLLLSLPHAQAAFPQDPIPLLTSDLQGTSPLSWFRGLEEDAVAAELG
LDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKFLTWRSQDVENCAVRGRLTDE
CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
FAEGSLYSATAADFQASDAVVYRSLGQQPPLRSAKYDSKWLREPHFVYALEHGDHVYFFF
REVSVEDARLGRVQFSRVARVCKRDRGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
QALTGPVDLHGRPALFGVFTTQANSIPGSAVCAFYLDDVERGFEGKFKEQRSLDGAWAPV
SEDRVPSPRPGSCAGVGGAALFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSR
ALLTQVAVDGKAGPHRNTTVLFLGSHDGTVLKVLPPGGQSLGPEPVILEEIDAYSPARCG
GKRSARAARRIIGLELDTEGHRLFVAFPGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
RLKGCVTIRGPGGTDMDVTGNQESMEHGDCQDGATGSQSGPGDSAYVLLGPGPSLEIPSS
PSDAHPGPQSSTLGAHTQGVRRDLPPSSASRSIPIPLLLACVAAAFALGASVSGFLVSCA
CRRAHRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPPPPKDGDAAAAPTPQLYTTFLPP
PEGGGPPGPELACLPTPESTPELPVKHLRASGGPWEWNQNGNNASEGPGRPRGCSAAGGP
APRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPQPPPRQGADALSSAPCPSRRPPAPE
PGAALFADSSPLPRDCAPPPLRLDVPPXGKRAGAGAGGRPALSAPAPRLGVGRRLPFPTH
RAPPPALLTRVPSAGPARYSGGPGRHLLYLGRPDGYRGRSLKRVDVKAPLSPKPPLAASP
PPQPAPHGGHFNF
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgccccctgccccccactccatgcccttgctgctgctgctgctgctgctgtctctgccc
catgcccaggctgcctttccccaggaccccatccctctgttgacctctgacctgcagggt
acttctccattatcctggttccggggcctggaggaggatgctgtggctgcagaacttggg
ctggactttcagcgattcctgaccttgaaccggaccttgcttgtggccgcccgggatcac
gttttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccaacaagttt
ctgacatggaggagccaagatgtggagaactgcgctgttcggggaaggctgacggacgaa
tgctacaactacatccgtgttcttgttccctgggactcgcagacgctccttgcctgtgga
acaaactcgttcagccccgtgtgccgcagttacgggataacttcgctgcaacaggagggt
gaggagctgagtgggcaagctcgatgcccctttgacgccacccagtcaaatgtggccatc
tttgcagagggcagtttgtactcggccaccgcagcagacttccaggccagtgacgctgtc
gtttacagaagtctcggacagcagcctccactccgttctgccaagtatgactccaagtgg
ttgcgagagccacactttgtctacgctttggagcacggagaccacgtctacttcttcttc
cgagaggtctctgtggaggatgcccggctggggagggtgcagttttcccgggtagcccgg
gtgtgtaaacgtgatcggggtggctcacctcgggccttggatcgccactggacatccttc
cttaagctgaggctcaactgctctgtccctggggactctaccttctactttgacgtccta
caggccttaactgggcctgtggacctgcatggccgccccgccctctttggggtcttcact
actcaagccaatagcattcctgggtctgcagtctgcgccttctacctggatgacgttgag
cgcgggtttgagggcaagttcaaggagcagaggagcctggatggggcctgggctcctgtg
tctgaggaccgagtcccctcccccaggccagggtcctgtgcaggtgtgggtggagctgcc
ttgttctcctcctctcaagacctacctgatgatgtcctgctcttcatcaaggcacatcca
ctgctggatcctgctgtaccacctgccacccatcagcccctcctcactctcactagcaga
gccctgctgacccaggtggcggtggatggcaaggccgggccccacagaaacaccacagtc
ctgtttcttggctcccacgatgggacggtgctgaaggtgctacctccagggggacagtct
ctgggacctgagcctgtcatactggaagagatcgatgcctacagccctgcccggtgcggt
gggaagcgctcagcccgagctgcgcggcggatcatcgggctggagctggacactgagggt
cacaggctctttgtggcctttcctggctgtatcgtctacctcccactcagccgctgtgcc
cggcatggggcatgtcagaggagctgtctggcttctcaggacccgtactgtggctggcat
cggttgaaaggctgtgtgactatcaggggacctggtgggactgatatggatgtgactggg
aaccaggaatccatggagcatggtgactgccaagatggagctactgggagccagtccggc
cctggagactctgcttatgtgcttctgggtcctggcccttcccttgagatccccagttcc
cccagtgatgctcacccagggccccagtcttccactcttggagctcacacgcagggcgtg
cgcagggaccttcccccatcttcagcctcccgctccatccccatcccactcctcctggcc
tgcgtggcggcggccttcgccctgggcgcctccgtctccggcttcttggtgtcctgcgct
tgtcgtcgcgcgcaccgccgtcggagcaaggacatcgagaccccggggctgccgcgccct
ctctccctccgcagcctggcccggctgcacggtggcggtcctgagcccccgcctccgccc
aaggatggagatgccgccgccgcgccgacgccacagctctacacgaccttcctgccgccg
cccgagggcgggggacccccgggcccggagctggcctgcctgcccaccccggagtccacg
cccgagctgccggtgaagcacctccgcgcctccgggggtccctgggagtggaaccagaac
gggaacaacgcctcggagggcccgggccgcccacggggctgcagcgcggcgggcgggccc
gcgccgcgcgtgctggtgaggccgcccccgccgggctgccccgggcaggcggtggaggtg
accacgctggaggaactgctgcgctacctgcacggcccgcagccgcagccgccgccccgc
cagggcgccgacgcgctctcctcggccccgtgcccctcgcggcggccgcccgccccggag
cccggcgccgccctcttcgcggactccagcccgctgccgcgggactgcgcgccgccgccg
ctgaggctcgacgtgcccccgnagggcaagcgcgcgggcgcgggcgcgggcgggcggccc
gccctctcggccccggccccgcgcctgggcgtcggccgccggctgcccttccccacgcac
cgcgcgccgcccccggccctgctcacgcgcgtgccctcggcgggcccggcccggtactcc
ggcgggcccgggaggcacctcctctacctgggccggcccgacggctaccgcggccgctcc
ctcaagagggtggacgtgaaggccccgctgtcccccaagccgcccctcgccgcctcgccg
ccgccgcagcccgcgccgcacggcggccattttaacttctga
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