Peromyscus leucopus (white-footed mouse): 114683221
Help
Entry
114683221 CDS
T07241
Symbol
Rorc
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04659
Th17 cell differentiation
pleu04710
Circadian rhythm
pleu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
114683221 (Rorc)
09159 Environmental adaptation
04710 Circadian rhythm
114683221 (Rorc)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
114683221 (Rorc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114683221 (Rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pleu03310
]
114683221 (Rorc)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114683221 (Rorc)
Nuclear receptors [BR:
pleu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114683221 (Rorc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114683221
NCBI-ProteinID:
XP_028713268
LinkDB
All DBs
Position
6:68811433..68837623
Genome browser
AA seq
523 aa
AA seq
DB search
MDRAPQRHHRTSRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLLQQQQQQQQQQQEQVAKTPPAGGHGADTLTYTLGLPDGQLPLGASPDLPEASACPPGL
LKASGSGPPYSNNLAKTEVQGASCHLEYSPERGKAEGRDSSIYSTAGQLTSGRRGLPFEG
SRHPELGEAEQGPDSHCSPSFCSAPEAPYASLTDIEYLVQNVCKSYRETCQLRLEDLLRQ
RANLFSREEVTSYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIILLKA
GAMEVVLVRMCRAYNADNHTVFFEGKYGGVELFRALGCSELISSIFDFSHFLSXLRFSED
EIALYTALVLINANRPGLQEKRRVEHLQYNLELAFHHHLCKTHRQGLLAKLPPKGKLRSL
CSQHVEKLQIFQHLHPIVVQAAFPPLYKELFSTDVESPEGPTK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccgaacatctcgggagctgctggctgcaaagaag
actcatacttcacaaattgaagtcatcccttgcaagatctgtggggataagtcgtctggg
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgccgcagccaacag
tgtaatgtggcctactcctgcacccgtcagcagaactgccccatcgaccgcaccagtcga
aaccggtgccaacactgccgcctgcagaagtgcctggctctgggcatgtctcgagacgct
gttaagttcggccggatgtccaagaagcagagggacagtctccatgcagaagtgcagaaa
caactgctgcagcagcagcagcaacagcagcagcagcagcaggaacaagtggccaagact
cctccagcagggggccatggagcagatacccttacatacacactggggctcccagatggg
cagctgcccctgggcgcctcacctgacctacctgaggcctccgcttgtccccctggcctc
ctgaaagcctcaggctctgggccaccctattccaacaacttggccaaaacagaggtccaa
ggagcttcctgccaccttgagtacagccccgagcgaggcaaagccgaaggcagagacagc
agcatctatagcacagccggccagcttacttctggaagacgtggacttccttttgaggga
tccaggcatcctgagctgggggaagcagaacagggtccagacagccactgcagtcccagt
ttctgcagtgccccagaggcaccgtacgcctctctgacagacatagagtacctggtacag
aatgtctgcaagtcctaccgagagacctgccagctgcgactggaggacctgctgcggcag
cgcgccaacctcttctccagggaggaggtgaccagctaccagaggaagtcaatgtgggag
atgtgggaacgctgtgcccaccacctcaccgaggccattcagtatgtggtagagtttgcc
aagcggctctcgggtttcatggagctctgccagaatgaccagatcatactactgaaagca
ggagcaatggaagttgtgcttgtcaggatgtgccgggcctacaacgctgacaaccataca
gtcttttttgaaggcaaatatggtggcgtggagctgttccgagccttgggctgcagcgag
ctcatcagctccatattcgacttttcccacttcctcagtngcttgcgcttttctgaggac
gagattgccctctacacagccctggttctcatcaacgccaaccgacctgggctccaagag
aagaggagagtggagcatctgcagtacaatctggagctggccttccaccaccatctctgc
aagactcaccgtcaaggcctcctcgccaagctgccacccaaagggaaactccggagcctg
tgcagccagcacgtggaaaagctgcagatcttccagcacctccaccccatcgtggtccag
gctgccttccctccactctataaggaactcttcagcactgatgttgagtcgcctgagggg
ccaaccaagtga
DBGET
integrated database retrieval system
