Peromyscus leucopus (white-footed mouse): 114683382
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Entry
114683382 CDS
T07241
Symbol
Smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X2
KO
K06636
structural maintenance of chromosome 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04110
Cell cycle
pleu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114683382 (Smc1a)
04114 Oocyte meiosis
114683382 (Smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114683382 (Smc1a)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114683382 (Smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
114683382 (Smc1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
114683382
NCBI-ProteinID:
XP_028713513
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All DBs
Position
X:21814568..21860496
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AA seq
1236 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELAAKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
ESVSGSQKTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQVDCSIPGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAA
LALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKA
ESLIGVYPEVGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaaatcgtacaagggtcgacagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgcttggtgagaaaaccagcaacttgagagtaaagact
ctgcgggacctgatccatggagctcctgtgggcaagccagctgctaaccgagcctttgtg
agcatggtctactctgaggagggggctgaggaccgcacttttgcccgtgtcattgtaggg
ggctcttctgagtacaagatcaacaacaaagttgtccagctacatgaatacagtgaagag
ttagagaaattgggcattctcatcaaagctaggaacttccttgtcttccagggcgcagtg
gagtctattgccatgaagaaccccaaggagaggacagctctatttgaagaaattagtcgc
tctggggaactagcacaagagtatgacaagcgaaagaaagaaatggtgaaggctgaagag
gacacacagtttaattaccaccgcaagaaaaatatcgcagctgaacgcaaggaggccaaa
caagaaaaagaagaggcggaccgctaccagcgcctgaaggatgaggtggtacgagcacag
gtacagttgcagctctttaagctttaccataatgaagtggagattgagaagctcaacaag
gaactggctgctaagaacaaagagattgagaaggacaagaagcggatggacaaggtagag
gatgagctgaaggagaagaagaaagagctgggcaaaatgatgcgggaacagcagcagatt
gagaaggagatcaaggaaaaggactcagagttgaatcagaagcggcctcagtacatcaaa
gccaaagagaatacctcccacaaaatcaagaagcttgaagcagccaagaagtctcttcag
aatgctcagaagcattacaagaaacgtaaaggtgacatggatgagctggagaaggagatg
ttgtcagtggagaaggcccgacaggagtttgaagaacggatggaggaagagagtcagagt
cagggcagagacttgaccctggaggagaatcaggtcaagaaataccaccgactgaaagaa
gaagctagcaagagggcagccactttggcgcaggagctggagaagtttaatagagaccag
aaagctgaccaggaccgtctagatctggaagagcggaagaaagtagagacagaggccaag
atcaagcaaaagcttcgggagattgaagagaatcaaaaacggatcgagaagctagaggag
tatattaccactagcaaacagtccctagaggagcagaagaagctggagggagagttgaca
gaggaggtggagatggccaagcgccgtattgatgagatcaataaggagctgaaccaggtg
atggagcaattgggggatgcgcgcattgaccgccaggagagcagtcgccagcagcgaaaa
gcagagataatggagagcatcaagcgtctctaccctggttctgtgtatggccgcctcatt
gacctctgccagcctacacaaaagaagtatcagattgctgtgaccaaggttttaggaaag
aacatggatgctattattgtggactcagagaagacaggtcgggattgtattcagtatatc
aaggagcaacgtggagagcctgagaccttcttgcctcttgactacctggaggtcaaacct
acagatgagaaactccgggagctgaagggggccaagctagtgattgatgtgattcgctat
gaaccacctcacatcaaaaaagctctgcagtatgcttgtggcaatgcccttgtttgtgac
aatgtggaggatgcccgacgcattgcttttggaggtcaccaacgccacaagacagtggca
ctggatggaaccctgttccagaagtcaggagttatctctggtggagccagtgatctcaag
gcaaaggcacgacgctgggatgagaaagcagtagacaagctgaaagaaaaaaaagagcgc
ttgacagaggagctgaaagagcagatgaaggccaaacggaaagaggcggaactgcggcag
gtgcagtcccaggcccatgggctacaaatgaggctgaagtactcccagagtgacctagag
cagactaagacaaggcatcttgccctgaatctccaggaaaagtctaagctggagagtgag
ctggccaactttggacctcgcatcaatgatatcaagagaatcatccagagccgagaaagg
gaaatgaaagacttgaaggagaagatgaaccaggtagaagatgaggtgtttgaagagttt
tgtcgggagattggtgtgcgcaacatccgagaatttgaggaagaaaaggtgaagcggcag
aatgagattgccaagaagcgcttggaatttgagaatcagaagactcgcttgggcatccaa
ttggattttgagaagaaccagctgaaggaagatcaggataaagtacacatgtgggagcag
acagtaaaaaaggatgaaaatgagatagaaaagcttaagaaggaggaacaaagacacatg
aagataatagatgagaccatggctcagctacaagaccttaagaatcagcacctggccaaa
aagtcagaagtgaacgacaagaaccacgagatggaagagattcgcaagaagcttgggggt
gccaacaaggaaatgactcatttacagaaggaggtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaacctgctacaggcctgtaagatgcaggacatcaaattg
ccactgtcaaagggcaccatggatgatattagtcaggaagaaggtagctcccagggagag
gagtcagtgagtggttcccagaaaacatccagtatctatgctcgagaggccctcatcgag
attgactacggtgacctgtgtgaggatctgaaggatgcacaggcggaggaggaaatcaag
caagagatgaacacactacagcaaaagctgaatgagcagcagagtgtgcttcagcggatt
gctgcccccaacatgaaggccatggaaaagctggagagtgtccgagacaagttccaggag
acctcagatgagtttgaggcagcacgaaagcgagcaaagaaggccaagcaggcatttgaa
cagattaagaaggagcgctttgaccgattcaatgcttgttttgagtctgtggctaccaac
attgatgagatctataaggctctgtcccgaaatagcagtgcccaggtagactgcagcatt
cctgggcccgagaatcctgaagagccctatttggatggcatcaactacaattgtgtagct
cctggcaaacgcttccggcctatggacaatttgtccggcggggagaagacagttgcagct
ctggccttgctttttgccatccacagctacaagccagcccccttctttgtcctggatgaa
attgatgctgccttggataacaccaacattggcaaggtggcaaattacatcaaggagcag
tcaacttgcaacttccaggctattgtcatctctctcaaagaggaattctacaccaaggct
gagagcctcattggagtctatcctgaggtaggggactgtgtgatcagcaaagtcctgacc
ttcgacctcaccaagtacccagatgccaacccaaaccccaatgaacaatag
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