Peromyscus leucopus (white-footed mouse): 114683448
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Entry
114683448 CDS
T07241
Symbol
Abca1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu02010
ABC transporters
pleu04148
Efferocytosis
pleu04975
Fat digestion and absorption
pleu04979
Cholesterol metabolism
pleu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114683448 (Abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114683448 (Abca1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
114683448 (Abca1)
04979 Cholesterol metabolism
114683448 (Abca1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
114683448 (Abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleu02000
]
114683448 (Abca1)
Transporters [BR:
pleu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114683448 (Abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
114683448
NCBI-ProteinID:
XP_037059222
LinkDB
All DBs
Position
2:68538030..68654794
Genome browser
AA seq
1893 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SIKDIHKVLRTLRQIKHSNSNLKLQDFLVDNETFSGFLHHNLSLPRPTVESLLQADVSLQ
KVFLQGYQLHLASLCNGSKLEDIVRLGEPAVSALCGLPREKLDAAERMLRYNMDILKPVV
TSLNSTSLPTHHLAEATKTLLDSLAGLAQELFSTKSWSDMRQEVMFLTNVNGSGSSTQIY
QAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEDMDTFYDNSTTPYCNDLMKN
LESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSP
QIWTFMESSQEMDLVRTLLDSRGNDQFWEQKLDGLDWTAQDIMAFLAKNPENVQSPNGSV
YTWREAFNETSQAIRTISRFMECVNLNKLEPVPTEVRLINKSMELLDERKFWAGIVFTGI
TPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVE
QAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVY
EKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVF
LSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFASL
LSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTWY
IEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHLGSSQKGVSEICMEEEPTHLRLGVSI
QNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILG
KDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGL
PPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSS
CRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIG
HELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAET
SDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDIDPESRETDLLSGMDGKGSYQLKG
WKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQP
WMYNEQYTFVSNDAPEDTGTQELLNALTKDPGFGTRCMEGNPIPDTPCLVGEEDWTTAPV
PQTIVDLFQNGNWTMKNPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQNTADILQNLT
GRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQALPPSQEVNDAIKQVKKL
LKLTKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQKG
ENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERV
SKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALL
LLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNVSAADRA
LPAGLHSGCQRMVVNLDLIPLVCNTDTTDHSAFAASAFSSLYKSISVLLSLVFLWCGESV
LGDASVVQGEPSPGPREHCGEDLIALTSETTVA
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagttaaggttgctgctgtggaagaacctgacgttccgaagacga
caaacatgtcagctgttactggaagtggcctggcctctctttatcttcctgatcctgatc
tccgtccgcctgagctacccgccctatgaacaacatgagtgccactttccaaataaagcc
atgccttctgcaggaacccttccgtgggtacaggggattatctgtaatgccaacaaccct
tgcttccgttacccgactcccggtgaggctcccggtgttgttggaaactttaacaagtcc
attgtgtctcgcctgttctcagatgctcggaggcttcttctatacagccaaaaggacacc
agcattaaggacatccacaaggtcctaagaacgttacgacagatcaagcattccaactca
aacttgaagctccaggatttcctggtggacaatgaaaccttctctggattccttcatcac
aacctatccctcccaaggcccactgtggagagcctgctgcaggctgatgtcagtctccag
aaggtatttttgcaaggctaccagttacatttggccagcctgtgtaatggatcaaaatta
gaagacatcgttcggcttggtgagccagcagtttctgccctttgtggtttaccgagggag
aagctggatgcagcagaaagaatgctgcgttacaacatggacatcctgaagccggtcgtg
acaagtctaaactccacatctctcccgacccaccacctggctgaagccaccaaaacattg
ctggacagcctagcggggttggcccaagagctgttcagcacaaagagctggagtgacatg
cgacaggaggtgatgtttctgaccaacgtgaacggctccggctcctccacccagatctac
caggctgtgtcccgcatcgtctgtggtcacccagagggcggggggctgaagatcaagtca
ctcaactggtacgaggataacaactacaaagccctctttggaggcaacagcactgaggag
gacatggacaccttctatgacaactccacaactccttattgcaatgatttgatgaagaac
ttggagtccagtcctctttctcgaattatttggaaggcactcaagccactgcttgttgga
aagattctgtatacacctgacactccagctacgaggcaggtcatggctgaggtgaacaag
accttccaggagctggctgtgttccatgacctggagggtatgtgggaagaactcagcccc
caaatctggacctttatggagagcagccaagagatggaccttgttcggacgctgttagac
agcagaggcaatgaccagttttgggaacagaagttggatggattagattggaccgcccaa
gacatcatggcatttctggccaagaacccagagaatgttcagtccccaaatggctctgtg
tatacgtggagagaagctttcaatgaaaccagccaggcaatccggacgatatctcgcttc
atggagtgtgtcaacctgaacaagttggagcccgttccaacagaagtccgcctcatcaac
aagtccatggagctgctggatgagaggaagttctgggctggtatcgtgttcacaggaatc
actcctggcagtgtggagctgccccatcacgttaagtacaagatccgaatggacattgac
aacgtggagaggaccaataagatcaaggatgggtactgggaccccggtccccgggctgac
ccctttgaggatatgcgctacgtctgggggggcttcgcctacttgcaggatgtggtggag
caggcgatcatcagagtgctgacgggaaccgagaagaaaacgggcgtctatgtgcaacag
atgccctacccctgttatgtcgatgacattttcctgagggtgatgagccggtccatgcct
ctcttcatgaccttggcctggatttactctgtggctgtgatcatcaagggcattgtgtat
gagaaggaggcgcggttgaaggagaccatgcggatcatgggtctggacaatggcattctc
tggtttagctggttcatcagcagcctcatccctctgctcgtgagtgctggcctgctggtt
gtcatcttgaagctaggaaacctgctgccctacagtgaccccagcgtggtgtttgtcttc
ctgtctgtgtttgccgtggtgaccatcctacagtgcttcctcattagcacgctcttctcc
cgggccaacctggccgcagcctgtggaggcatcatctacttcacgctgtacctgccctac
gtcctgtgcgtagcctggcaggactatgtgggcttctccattaagatctttgctagcctt
ctgtctcccgtggcttttggatttggctgtgaatactttgccctttttgaggagcaaggc
atcggggtacagtgggacaatctctttgagagcccggtggaggaagacggctttaatctc
accaccgcagtgtccatgatgctgtttgacactttcctctatggagtgatgacatggtac
atcgaagccgtctttccaggacagtatgggattcccaggccctggtattttccttgtacc
aagtcctactggtttggtgaggaaagtgatgagaagagccaccttggttccagccagaaa
ggagtatcagaaatctgcatggaagaagaacccactcatctgaggctgggtgtgtccatt
cagaacctggtgaaggtttaccgagatggcatgaaggtggctgtggatggcttggcgcta
aatttttatgagggccagatcacctccttcctgggtcacaatggagcagggaaaaccacc
accatgtcaatactcactgggttgttccccccaacatccggcactgcctacatcctgggg
aaggacattcgctctgagatgagttccatccggcagaacctgggagtctgtcctcagcat
aatgtgttgtttgacatgctgacagtcgaagaacacatttggttctacgcccgcctgaag
gggctctcagagaagcacgtgaaagcggagatggagcagatggccctggatgttggccta
ccccccagcaaactgaaaagcaaaacaagccagctctcgggtgggatgcagaggaagctg
tctgtggccttggcttttgtgggtggatccaaggttgtcattctggatgagcccacagca
ggtgtggacccttactctcgcaggggaatatgggagctcctgctgaaatatcgacaaggc
cgcaccattattctgtctacacaccacatggatgaagcagacatcctgggggaccgaatt
gccatcatttcccatgggaagctgtgctgtgtgggctcctccctgtttctgaaaaaccag
ctgggaaccggttactacctgaccttggtcaagaaagatgtggaatcgtccctcagttcc
tgcagaaacagcagcagcactgtgtcatgtctgaagaaggaggacagtgtttctcagagc
agttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtctct
gccatctccaacctcatcaggaagcatgtatctgaagcccggctggtggaagacattggc
catgaactgacttacgtgctgccgtatgaagctgctaaggagggagctttcgtggaactc
ttccacgagattgatgatcggctctcagacttgggcatctccagttatggcatctcagag
accaccctcgaagaaatattcctcaaagtggctgaagagagtggggtggatgcggagacc
tcagatggcactttgccagcgagacgaaacagacgggccttcggggacaagcagagctgt
ctgcgcccgtttactgaagacgatgctattgatccaaatgactctgacatagacccagaa
tccagggagacagacctgctcagtgggatggatggcaaaggctcctaccagctgaaaggc
tggaaactcacacaacaacagtttgtggcccttttgtggaaaaggctgctgatagccaga
cggagcaggaaggggttctttgctcagattgtcctgccagctgtctttgtttgcattgcc
ctggtgttcagcctgatcgtgccaccctttggcaagtaccccagcctggaactacagccc
tggatgtataatgagcagtatacatttgtcagtaatgatgctccagaggacacaggcacc
caggaactcctgaatgctctaaccaaagacccaggctttgggacccgatgtatggaagga
aacccaatcccagataccccttgcttggtgggggaggaggactggaccactgccccagtt
ccccagaccatcgtggacctctttcaaaatgggaactggacgatgaagaacccctcacct
gcctgccagtgcagcagtgacaaaatcaagaagatgctccctgtgtgtcccccgggggcc
ggggggctgccgcctcctcagagaaaacagaacacagcagacatccttcagaacctgacg
ggaagaaacatttccgattacctggtgaagacgtatgtgcagatcatagcgaaaagctta
aagaacaagatctgggtgaatgagttccgatatggtggattttccctgggcgtcagtaat
tctcaagcacttcctccgagtcaagaagtaaatgatgctatcaaacaagtgaagaaactc
ttgaagctgaccaaggacagttctgcagatcggtttctcagcagtttgggaaggttcatg
acaggactggataccaaaaacaatgtcaaggtgtggttcaataacaagggctggcacgct
atcagctctttcctgaatgtcatcaacaacgccattctccgggccaacctacagaaggga
gagaatccaagccagtatgggattactgctttcaaccatcccctgaatctcaccaagcag
cagctctcagaggtggccctgatgaccacatctgtcgacgtccttgtgtctatttgtgtc
atctttgcgatgtcctttgtcccagccagctttgttgtgttcctgatccaggagcgggtc
agcaaagcgaagcacctgcagttcatcagcggggtgaagcctgtcatctactggctctcc
aattttgtgtgggatatgtgcaattatgtggttcctgctacactggtcattatcatcttc
atctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtcctagcccttttg
cttttgctgtatgggtggtcgatcacacctctcatgtacccagcctccttcgtgttcaag
atccccagcactgcctacgtggtcctcaccagtgtgaacctcttcatcggcatcaatggc
agtgtggccactttcgtactggagctctttaccaacaatgtgagtgccgcagacagagca
cttccagctggcttgcactccgggtgccagaggatggtggttaaccttgaccttattcca
cttgtctgtaacactgacaccactgaccactctgcttttgcagcgtctgccttctctagt
ttatataaatctatttctgtcctgctaagccttgtatttctctggtgtggtgagtcagtt
ctcggtgacgcttctgtggtgcagggggagccaagccctggtcctcgggaacactgcgga
gaggacctcattgcactcacgagcgagaccacagtggcttga
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