Peromyscus leucopus (white-footed mouse): 114683645
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Entry
114683645 CDS
T07241
Symbol
Nxf1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03008
Ribosome biogenesis in eukaryotes
pleu03013
Nucleocytoplasmic transport
pleu03015
mRNA surveillance pathway
pleu05014
Amyotrophic lateral sclerosis
pleu05164
Influenza A
pleu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114683645 (Nxf1)
03015 mRNA surveillance pathway
114683645 (Nxf1)
03008 Ribosome biogenesis in eukaryotes
114683645 (Nxf1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
114683645 (Nxf1)
05168 Herpes simplex virus 1 infection
114683645 (Nxf1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114683645 (Nxf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114683645 (Nxf1)
03009 Ribosome biogenesis [BR:
pleu03009
]
114683645 (Nxf1)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114683645 (Nxf1)
mRNA cycle factors
Stress granule specific factors
114683645 (Nxf1)
Ribosome biogenesis [BR:
pleu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
114683645 (Nxf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
UBA_8
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
114683645
NCBI-ProteinID:
XP_028713802
LinkDB
All DBs
Position
1:complement(53927037..53941309)
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AA seq
616 aa
AA seq
DB search
MADGGKSYNEHDDRVSFPQRRKKGRGPFRWKCEGNRRSGRGGSGVRSSRFEEDDGDVAMN
DPQDGPRVRYNPYANRPNRRGDTWHDRDRIHITVRRDRAPPERAGAGTSQDGTTKNWFKI
TIPYGKKYDKTWLLSMIQSKCSVPFNPIEFHYENTRAQFFVEDASTASALKAVNYKIHDQ
ENRRISIIINSSAPPHTVQNELKPEQIEQLKLVMSERYDGSQQALDLKGLRSDPGLVAQN
IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYKLDDMSSIVQKAPNLKTLNLSGNE
LKSEWELDKIKGLKLEELWLDRNPMCDNFQDQSTYISAIRERFPKLLRLDGHELPPPIAF
DVEAPTVLPPCKGSYFGTESLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLTVPS
TPQNSVRNLGEYVKDSRNVKKFKEPTVRFRLLKHTRLNVVAFLNELPKTQHDINSFVVDI
SAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASPEE
IQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAF
THLKAKGEIPEVAFMK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagggaagtcatacaacgagcatgatgaccgtgttagtttccctcagaga
agaaagaaaggccgcgggcctttccgatggaagtgtgaggggaatcgtcggtctggaaga
ggtggttctggtgtacggtcttcccggtttgaggaagatgatggagatgtggcaatgaat
gatccccaagatggcccccgagtaagatacaacccctatgccaaccggcctaaccgtcgg
ggggatacttggcatgatcgagatcgaattcatattactgtaaggagagacagagctcct
ccagagagagcaggggctggtaccagccaagatgggaccaccaagaactggttcaagatt
acaattccttatggcaaaaagtatgacaaaacgtggctcttgagcatgattcagagcaag
tgcagtgtccccttcaaccccattgagtttcactatgaaaacacacgggcccagtttttt
gtggaagatgccagtactgcttctgcattaaaggctgtaaactataagattcacgatcaa
gaaaacagaaggatatctatcatcatcaactcctctgctccacctcacactgtacagaat
gaactgaagcctgaacaaatagagcagctcaagctggtcatgagtgaacgatatgatggc
tcccaacaagcacttgacctcaagggcctccgctcagacccaggtttggtggcccagaac
attgatgttgttctaaaccgcagaagctgtatggcggccacactgcggatcattgaagag
aatattcctgagctactgtctttgaacttgagcaacaacagactatacaagctggatgat
atgtccagcattgtacagaaagcgccgaatctaaagaccctaaatctctctggaaacgaa
ttgaagtctgagtgggaattagacaagataaaagggttgaagttggaagagttgtggctt
gacagaaaccccatgtgtgataacttccaagaccagtccacctatatcagcgccattcgc
gaacgatttcccaagttattacgcctggatggccatgagctaccccctccaattgccttt
gatgttgaagcccccacagtgctaccaccctgcaagggaagctattttggaacagagagc
ctaaagagtttggtcctgcacttcttgcagcagtactacgcaatttatgactcaggagac
cgccagggtctcctggatgcctaccatgatggcgcctgttgttcgctaaccgttccttcc
accccccagaactctgtccgcaacttaggtgaatacgtcaaagacagcagaaacgtgaag
aagtttaaagagcccaccgtgcggttccggctattgaagcacacacgtctcaacgttgtt
gccttcctcaatgagttacctaaaactcaacatgacatcaattcctttgtggtagacata
agtgcgcaaacaagcacattgctgtgtttttctgtcaatggagtcttcaaggaagtggat
gggaagtctcgagattcgttacgtgctttcacaagaacgttcattgctgttcctgccagc
aattcagggctatgtattgtaaatgatgaattgtttgtgcggaatgccagccctgaagaa
atccaaagagccttcgccatgcctgcacccacaccttcttccagcccagtacccacgctc
tccccagaacaacaggaaatgttgcaagcattctctacccagtctggcatgaacctcgag
tggtctcagaagtgccttcaagacaataactgggactacaccagatctgctcaggccttc
actcatctcaaggccaagggagagattccagaagtagcgtttatgaaatga
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