Peromyscus leucopus (white-footed mouse): 114683746
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Entry
114683746 CDS
T07241
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04066
HIF-1 signaling pathway
pleu04137
Mitophagy - animal
pleu04140
Autophagy - animal
pleu04148
Efferocytosis
pleu04659
Th17 cell differentiation
pleu04919
Thyroid hormone signaling pathway
pleu05167
Kaposi sarcoma-associated herpesvirus infection
pleu05200
Pathways in cancer
pleu05205
Proteoglycans in cancer
pleu05208
Chemical carcinogenesis - reactive oxygen species
pleu05211
Renal cell carcinoma
pleu05230
Central carbon metabolism in cancer
pleu05231
Choline metabolism in cancer
pleu05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
114683746 (Hif1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114683746 (Hif1a)
04137 Mitophagy - animal
114683746 (Hif1a)
04148 Efferocytosis
114683746 (Hif1a)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
114683746 (Hif1a)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
114683746 (Hif1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
114683746 (Hif1a)
05205 Proteoglycans in cancer
114683746 (Hif1a)
05208 Chemical carcinogenesis - reactive oxygen species
114683746 (Hif1a)
05230 Central carbon metabolism in cancer
114683746 (Hif1a)
05231 Choline metabolism in cancer
114683746 (Hif1a)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
114683746 (Hif1a)
09162 Cancer: specific types
05211 Renal cell carcinoma
114683746 (Hif1a)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
114683746 (Hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114683746 (Hif1a)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114683746 (Hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
114683746
NCBI-ProteinID:
XP_028713904
LinkDB
All DBs
Position
14:41670529..41720637
Genome browser
AA seq
831 aa
AA seq
DB search
MEGAGGENEKKNRMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESEDTSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSDDTE
TEDQQLEDVPLYNDVMFPSNNEKLTNINLAMSPLPASETPKPLRSSADPALNQEVALKLE
PSPESLELSFTMPQIPDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPPSVSTVTVF
QQTQLQKPTITATAATPATTTTAPTDEVKAVTKDTLEDIKILIASPPSTPVPQETTAAPA
PAYSAPHSRTASPDRAGKRVREHTEKAHPRSPNGSVTLSQRNTVPEEELNPKIIALQNAQ
RKRKMEQDGSLFQAAGIVSGTLLQQPGDRAPTTSLSWKRVKGCKSSEQNGMEQKTIILIP
SDLACRLLGQSMDQSGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgagaacgagaagaaaaataggatgagttctgaacgtcgaaaa
gaaaagtctagagatgcagcaagatctcggcgaagcaaagagtcggaagttttttatgag
cttgctcatcagctgccacttccccacaatgtgagctcacatcttgataaagcttctgtt
atgaggctcaccatcagttacttacgtgtgaggaaacttctggatgctggtgatctggac
attgaagatgaaatgaaagcacagatgaactgcttctatttgaaagccctggatggcttt
gttatggtgctcacagacgatggtgacatgatttacatttctgataacgtcaacaaatac
atggggttaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgt
gaccatgaggaaatgagagaaatgcttacacacagaaatggcccagtgaaaaaaggtaaa
gaacaaaacacccaacgaagcttttttctcagaatgaaatgtaccctaactagccggggg
agaacaatgaacataaagtctgcgacgtggaaggtgcttcactgcacaggccatattcac
gtatatgataccaacagtaaccaacctcagtgtgggtacaagaaaccacccatgacatgc
ttggtgctgatttgtgaacccatccctcatccatcaaatattgaaattcctttagatagc
aagacttttctcagtcgacacagcctggatatgaaattttcttactgtgatgaaagaatt
actgagttgatgggttatgagccagaagaacttttgggccgctcaatttatgaatattat
catgctttggactctgatcatctgaccaaaactcatcatgatatgtttactaaaggacaa
gtcaccacaggacagtacagaatgcttgccaaaagaggtggatatgtctgggttgaaact
caagcaactgtcatatataatacgaagaactctcagccacagtgcatcgtgtgtgtgaac
tatgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcaccaaagtggaa
tcagaggataccagctgcctctttgataagcttaagaaagaacccgatgctctgactctg
ctggccccggctgctggggacacgatcatatctctagattttggcagcgatgacacagaa
actgaagaccaacaacttgaagatgttccattatataatgatgtaatgttcccatctaat
aatgaaaaattaacaaatataaatctggcaatgtctccattacctgcctctgaaacgcca
aagccacttcgaagtagtgctgatcctgcactgaatcaagaagtcgcattaaaattagag
ccaagtccagagtcactggaactttctttcaccatgccccagattccagatcagcccgca
agtccttctgatgggagcaccagacaaagttcacctgagcctaacagtcccagtgaatat
tgttttgatgtggatagtgatatggtcaatgtattcaagttggaactggtggaaaaactg
tttgccgaagatacagaagcaaagaatccattttcaactcaggacaccgatttagacttg
gagatgctggccccttatatcccgatggatgatgatttccagttgcgttccttcgatcag
ttgtcgccattagagagcagttcctctagccctccaagtgtcagcacagttacagtgttc
cagcagacccagctacagaaacccaccattactgccactgctgccacacctgccaccacc
accaccgcccccactgatgaagtgaaagcagtgacgaaggacactctggaagacattaaa
atactgattgcatctccaccttccacccctgtacctcaagaaacgacagctgctcccgca
ccagcatacagtgctcctcacagtcggacagcctcaccagacagagcagggaagagagtc
agagaacacacagagaaagctcatccaaggagcccgaacggatctgtcactttgagtcaa
agaaatactgttcctgaggaagaattaaacccaaagataatagctttgcagaatgcccag
agaaagcgaaaaatggaacaagatggctcccttttccaagcagcgggaattgtgagtgga
acattattgcagcaaccaggtgaccgtgctcccactacgtcactttcttggaaacgtgtg
aaaggatgcaaatcaagtgaacagaatggaatggagcaaaagacaattattttaataccc
tctgatttagcatgcagactgctggggcaatcaatggatcagagtggattaccacagctg
accagttatgattgtgaagttaatgctcccatacaaggcagcagaaacctactgcagggt
gaagaattactcagagctttggatcaagttaactga
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