Peromyscus leucopus (white-footed mouse): 114683815
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Entry
114683815 CDS
T07241
Symbol
Six4
Name
(RefSeq) homeobox protein SIX4 isoform X1
KO
K15615
homeobox protein SIX4
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
114683815 (Six4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114683815 (Six4)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
114683815 (Six4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
114683815
NCBI-ProteinID:
XP_028714006
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Position
14:complement(40804060..40817654)
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AA seq
770 aa
AA seq
DB search
MSSSSPTGQIASAADIKQENGMESASEGQEAHREVAGGAAAGLSPPAPAPFPLEPGDGAA
ASRVSREEGAAAAGAADQVQLHSELLGRHQHTAAAQPPLAFSPDHVACVCEALQQGGNLD
RLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWY
KARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRY
PSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDL
SPHPLSGASDAVTNLSLSSHMEPVYMQQIGNAKISLSSSGVLLNGNLVPASTSPVFLNGN
SFIQGHNGVILNGLNVGNTQTGSPNPPKMSSNIVSNGLAMSDLLGSASQDVKEFKVLQSS
AVNSAATTSYSPSAPVPFPGLIPCTEVKREGGQTAASQEGGSVVTFTTPVQINQYGIVQI
PNSGANGQFLNGGIGFSPLQLPPVSVAASQGNISGNSSTSDGGTFTSESTPVQHGKLFLS
PLAPSAVVYTVPNSGQTGGAVKQEGLERGLVFSQLMPVSHNAQVNASLSPEDVSGSGLHP
LASSLVNVSPAHSFSLSPPTLLNPTELNSDLAESNVTSKSTVTSVGNTNYAALQNCPLIT
GQDLLSVPMTQATLGEIVPTAEEQVGHASPAVHQDFVREHRLALQSVANIKENFLQNSET
KATNNLMMLDSKSKYVLDGMVETVCEELATDKKELAKLQTVQLDEDMQDL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggacatcaagcaggagaat
gggatggaaagcgcctcagaaggacaggaggcgcaccgagaagtggcggggggcgcggcg
gctgggctgagccccccggctccagcccctttccctctggagccgggggacggcgcggct
gcctccagggtaagccgggaggaaggggcagcggcggcgggagcggccgatcaggtacaa
ctccactcggaacttctgggcaggcaccagcacacagccgccgcgcagccccctctggcc
ttctcgccggaccatgtcgcctgcgtgtgcgaggcgttgcagcaggggggcaacctggac
cgcctggcccggttcctgtggtccctgccccagagcgacctgctacgtggcaacgagagc
ctgctgaaggcgcgagcgctcgtggccttccaccagggcatctaccctgagttgtacagc
atcctcgagagccacagcttcgagtcggccaaccatccgctgctgcagcagctctggtac
aaggcgcgctacaccgaggccgagcgagcgcgcggccggccgctgggcgccgtggacaag
taccggctgcgcaggaaattccccttgccccgcaccatctgggacggcgaggagacggtg
tattgtttcaaggagaagtcgcgcaacgcgctcaaggagctctacaagcagaatcgctac
ccctcgcccgccgagaagcggcacctagccaagatcaccggcctctccctcacccaggtc
agcaactggttcaagaaccggcggcagcgcgaccggaacccctccgagacccagtccaaa
agcgaatccgatggcaaccccagcactgaagatgagtccagcaagggacatgaggatctg
tctcctcacccactttcgggtgcatctgatgccgtcaccaacctcagcctttctagccac
atggaaccagtatatatgcagcaaattgggaatgctaagatatcgttgagctcttctgga
gttttgttgaatggaaacttggtacctgcaagtacttcacctgtcttccttaatggtaat
tcttttattcagggacacaatggagttatccttaatggactgaatgtgggaaatacacag
acggggtcgccgaacccaccaaaaatgtcctcgaacattgtgagcaatggcctagccatg
tcggacctcttggggtctgcctcccaggatgtgaaagaattcaaagtcctccagagttct
gctgtgaactcggcggccaccacctcctacagccccagtgcccctgtgccgttcccaggg
ctgataccctgcactgaagtgaagagggaaggcggccagacagcggcctcccaggagggg
ggctcggtggtgacttttactacaccagtgcaaattaaccagtatggcattgtccagatc
cccaattccggagccaacggccagttccttaatggaggcattggattctctccactgcag
ctgccccctgtctcagtagcagcttcacaaggtaatatttcaggaaactcaagcacttca
gatggaggcacgtttacaagtgagtccaccccagtccagcatggcaaacttttcctgagc
cctcttgcccccagtgcagtggtctacacggttcctaactcaggccagactggaggagct
gtgaaacaggaaggcttagaaagaggcctggtgttctctcagctgatgcctgtcagtcac
aatgcacaagtaaacgcaagcctatctcctgaggacgtctccgggagtggcctccatccc
ctggcctcttcgctagttaacgtgtccccagctcacagtttttccctgtctccccctaca
ctactcaatcccactgagctgaactctgaccttgctgagagtaatgtgacaagtaagtct
actgtgacatctgtcggcaacaccaactatgcagcccttcagaactgtccccttattacc
ggtcaagacctactgtcagtccctatgactcaggccaccctgggggaaattgtccctaca
gctgaggagcaggtgggtcatgcctcgccagcggtccaccaggattttgtcagggagcat
cgcttggctctgcagtcagtggccaacataaaagagaatttcctacaaaattctgagacc
aaagcaacaaacaacttaatgatgttggactccaaatccaagtatgtcctggatgggatg
gttgaaactgtctgcgaagagctggcaacagataaaaaagagctggccaagctccagact
gtccagttggatgaagatatgcaagacttataa
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