Peromyscus leucopus (white-footed mouse): 114683859
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Entry
114683859 CDS
T07241
Symbol
Nxf3
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3
KO
K14284
nuclear RNA export factor
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03008
Ribosome biogenesis in eukaryotes
pleu03013
Nucleocytoplasmic transport
pleu03015
mRNA surveillance pathway
pleu05014
Amyotrophic lateral sclerosis
pleu05164
Influenza A
pleu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114683859 (Nxf3)
03015 mRNA surveillance pathway
114683859 (Nxf3)
03008 Ribosome biogenesis in eukaryotes
114683859 (Nxf3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
114683859 (Nxf3)
05168 Herpes simplex virus 1 infection
114683859 (Nxf3)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114683859 (Nxf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114683859 (Nxf3)
03009 Ribosome biogenesis [BR:
pleu03009
]
114683859 (Nxf3)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114683859 (Nxf3)
mRNA cycle factors
Stress granule specific factors
114683859 (Nxf3)
Ribosome biogenesis [BR:
pleu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
114683859 (Nxf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
TAP_C
NTF2
RRM_NXF1-2
Motif
Other DBs
NCBI-GeneID:
114683859
NCBI-ProteinID:
XP_037055152
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All DBs
Position
X:complement(89487052..89499797)
Genome browser
AA seq
599 aa
AA seq
DB search
MGHSSQTNPFQRRMKCRGIFRRRFLNSTEHIRDTMQMRTSFHQQQDGQPAMSNSPMYTRR
RYTPYGIPSRHQRINLYKQNQMHVNREEELKPPEREMQXDKQDDTSKNWFKVTIPSGIKY
NRKWLLDLIQSQCSIPFTPVEFHYEKMQAQFFVDNSGIAFELKSISDKIWDESNNKISIF
ISPCDEPHLVTELKSERMDQTKVATSQQVLNMQRLPFDQGMTDSNLMAHPTDLALKPGRY
MAPSLDMHEEDMTQALPLNQSYSKSYQLFGLLDTMAMAHPVDNLDVSKNEAKSAGERVKG
QDPNPEEICADKNSLSTTISDKPSNINSILELFPKLLSLDGQDSPKPALCGLEDHKSLPT
CKGSFFASEAVKTMVLQFLHQYYFIYDNGDRQGLLNAYHAEACFSLTVLFSAEDSSSSSL
WEYFKYSRNMKVLKDSYIRRQLLKHKKCDIIYFLRTLPKTQHDLTSFVVDICFQTETMIC
FSVSGLFKEVEGSSQGCTHAFTRTFIASYGNSSDLHIINDKLFVRNVQGLPSASIPVATL
PAFSQDQQKMMQSGMNAEWSQKCLNDEQWDYSKTIQSLALLKVQDVSPEDTSIQPGPGS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggggcacagctcccaaactaacccttttcaaagaagaatgaaatgtcggggtattttc
cgaaggagatttctgaactcgactgaacacatcagagatacaatgcaaatgcgtacttca
ttccaccagcagcaagatggacagccagcaatgagtaattctcccatgtatactcgaaga
agatacactccatatggtattccatcccggcatcagagaatcaacttatataaacaaaac
caaatgcatgttaacagggaggaagagctaaaacctccagagagagaaatgcagnaggac
aagcaagatgacacctcaaaaaactggttcaaggtcacaattccctctggcataaaatac
aataggaagtggctgttggatttgattcagagccagtgcagtatccctttcactccagtg
gagtttcactatgagaaaatgcaggcccagttttttgttgataattctggcattgccttt
gaactgaaaagtatcagtgacaagatttgggatgagtctaataataagatatcaatcttc
atcagcccctgtgatgaaccccacttggtgacagagctgaagtcagaaaggatggatcaa
acaaaggttgctacttcgcagcaagttcttaacatgcagagactcccctttgaccaaggc
atgactgacagtaatttgatggcccatcctactgacttggcactgaaacctggaaggtac
atggctccttccctggatatgcatgaagaggacatgacccaggctttgcccttgaaccag
agttacagcaaatcatatcagctgtttggcttgctcgatactatggcaatggcccatcct
gttgataacctggatgtctctaaaaatgaggcgaagtctgcaggggagagagtcaagggg
caagacccgaatccagaagagatatgtgcagacaaaaactctctgagtactaccatctcg
gataagcccagtaacataaattcaattctggaattgttccccaagttattaagcctggat
ggacaggattcacctaaaccagcactctgtggccttgaagaccacaagagcttaccaact
tgcaagggaagtttctttgcatctgaggctgtaaagactatggtcctacagtttctgcat
cagtattacttcatctatgacaatggagatcggcagggactccttaatgcctaccatgct
gaggcttgcttctctttgaccgtgctcttcagtgccgaggactcatcctcgagcagcttg
tgggagtacttcaagtatagtagaaatatgaaggttctcaaggattcttatattcggagg
cagctgctgaagcataaaaaatgtgacattatttactttcttcgtacattgcccaaaact
cagcatgacctcacctcctttgtggtggacatatgtttccagacagaaacaatgatttgc
ttctctgttagtggattgttcaaggaagtggagggcagctcgcagggatgtactcatgcc
ttcactcggaccttcattgcttcctatggcaacagttcagaccttcatatcatcaatgac
aagctgtttgtaaggaacgtccaagggcttcccagtgcctccatccctgtggccacatta
cctgccttctctcaagatcaacagaagatgatgcagtctgggatgaatgctgagtggtct
cagaagtgccttaatgatgagcagtgggattacagcaaaaccatacaaagcctggcttta
ctcaaggtacaggacgtgagcccagaggatacctccatacagccaggtccaggatcctaa
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